RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 GALNT6Q8NCL4 622 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 RASSF5Q8WWW0 418 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 TEFMQ96QE5 360 aaKnown RBP9.03□□□□□ -0.96
NEK1-203ENST00000507142 LRRC61Q9BV99 259 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 SPATA9Q9BWV2 254 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 MYLK2Q9H1R3 596 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 STOML2Q9UJZ1 356 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 TRIM38O00635 465 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 CASKO14936 926 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 ZNF749O43361 778 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 MATN1P21941 496 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 SLC7A2P52569 658 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 OR4D1Q15615 310 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 HES3Q5TGS1 186 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 PLD6Q8N2A8 252 aaKnown RBP9.03□□□□□ -0.96
NEK1-203ENST00000507142 RHEBL1Q8TAI7 183 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 RSC1A1Q92681 617 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 NSUN5Q96P11 429 aaKnown RBP9.03□□□□□ -0.96
NEK1-203ENST00000507142 GRIP2Q9C0E4 1043 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 CCDC134Q9H6E4 229 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 NXT1Q9UKK6 140 aaKnown RBP9.03□□□□□ -0.96
NEK1-203ENST00000507142 CBX6O95503 412 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 C6orf47O95873 294 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 SERPINA6P08185 405 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 LINGO3P0C6S8 592 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 EPHA8P29322 1005 aaPredicted RBP9.03□□□□□ -0.96
NEK1-203ENST00000507142 ADRA1AP35348 466 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 TMED1Q13445 227 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 KCNAB1Q14722 419 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 TLR1Q15399 786 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 IPCEF1Q8WWN9 437 aaPredicted RBP9.03□□□□□ -0.96
NEK1-203ENST00000507142 CTPS2Q9NRF8 586 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 TRBV11-1A0A0K0K1C0 115 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 ZCWPW2A0A1B0GU75 182 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 FAM234BA2RU67 622 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 OR5K3A6NET4 321 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 TMEM233B4DJY2 109 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 PLD2O14939 933 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 AKAP8O43823 692 aaKnown RBP9.03□□□□□ -0.96
NEK1-203ENST00000507142 TPST2O60704 377 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 PGM3O95394 542 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 ZNF28P17035 718 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 PTPN4P29074 926 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 LTBRP36941 435 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 DSTNP60981 165 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 MAT1AQ00266 395 aaKnown RBP9.03□□□□□ -0.96
NEK1-203ENST00000507142 SLC25A3Q00325 362 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 DPTQ07507 201 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 TMEM215Q68D42 235 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 GUSBP11Q6P575 273 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 OFCC1Q8IZS5 231 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 OR4K1Q8NGD4 311 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 EPB41L4BQ9H329 900 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 THUMPD1Q9NXG2 353 aaKnown RBP9.03□□□□□ -0.96
NEK1-203ENST00000507142 EGFL7Q9UHF1 273 aa9.03□□□□□ -0.96
NEK1-203ENST00000507142 KPNA4O00629 521 aaPredicted RBP9.02□□□□□ -0.96
NEK1-203ENST00000507142 NR0B1P51843 470 aaKnown RBP9.02□□□□□ -0.96
NEK1-203ENST00000507142 BLVRAP53004 296 aa9.02□□□□□ -0.96
NEK1-203ENST00000507142 OR13J1Q8NGT2 312 aa9.02□□□□□ -0.96
NEK1-203ENST00000507142 TEX47Q8TBZ9 253 aa9.02□□□□□ -0.96
NEK1-203ENST00000507142 ZNF480Q8WV37 535 aa9.02□□□□□ -0.96
NEK1-203ENST00000507142 FATE1Q969F0 183 aa9.02□□□□□ -0.96
NEK1-203ENST00000507142 PPP1R14AQ96A00 147 aa9.02□□□□□ -0.96
NEK1-203ENST00000507142 REEP4Q9H6H4 257 aa9.02□□□□□ -0.96
NEK1-203ENST00000507142 MKKSQ9NPJ1 570 aaPredicted RBP9.02□□□□□ -0.96
NEK1-203ENST00000507142 TIMMDC1Q9NPL8 285 aa9.02□□□□□ -0.96
NEK1-203ENST00000507142 TIGARQ9NQ88 270 aa9.02□□□□□ -0.96
NEK1-203ENST00000507142 EURLQ9NYK6 297 aa9.02□□□□□ -0.96
NEK1-203ENST00000507142 UBOX5O94941 541 aa9.02□□□□□ -0.97
NEK1-203ENST00000507142 SF3B4Q15427 424 aaKnown RBP eCLIP9.02□□□□□ -0.971e-6■■□□□ 14.1
NEK1-203ENST00000507142 FLYWCH1Q4VC44 716 aa9.02□□□□□ -0.97
NEK1-203ENST00000507142 SLC22A15Q8IZD6 547 aa9.02□□□□□ -0.97
NEK1-203ENST00000507142 NLGN4YQ8NFZ3 816 aaPredicted RBP9.02□□□□□ -0.97
NEK1-203ENST00000507142 ZNF382Q96SR6 550 aa9.02□□□□□ -0.97
NEK1-203ENST00000507142 G6PC3Q9BUM1 346 aa9.02□□□□□ -0.97
NEK1-203ENST00000507142 AKTIPQ9H8T0 292 aa9.02□□□□□ -0.97
NEK1-203ENST00000507142 B3GAT2Q9NPZ5 323 aa9.02□□□□□ -0.97
NEK1-203ENST00000507142 EHD3Q9NZN3 535 aa9.02□□□□□ -0.97
NEK1-203ENST00000507142 SCHIP1Q9P0W5 487 aaPredicted RBP9.02□□□□□ -0.97
NEK1-203ENST00000507142 TCRBV5S1A1TA0A578 114 aa9.02□□□□□ -0.97
NEK1-203ENST00000507142 IFNGP01579 166 aa9.02□□□□□ -0.97
NEK1-203ENST00000507142 IFNW1P05000 195 aa9.02□□□□□ -0.97
NEK1-203ENST00000507142 TIA1P31483 386 aaKnown RBP eCLIP9.02□□□□□ -0.97
NEK1-203ENST00000507142 VASPP50552 380 aaPredicted RBP9.02□□□□□ -0.97
NEK1-203ENST00000507142 CLCN2P51788 898 aa9.02□□□□□ -0.97
NEK1-203ENST00000507142 TOP3AQ13472 1001 aaPredicted RBP9.02□□□□□ -0.97
NEK1-203ENST00000507142 KLHL12Q53G59 568 aa9.02□□□□□ -0.97
NEK1-203ENST00000507142 LIMS2Q7Z4I7 341 aa9.02□□□□□ -0.97
NEK1-203ENST00000507142 SEC14L1Q92503 715 aa9.02□□□□□ -0.97
NEK1-203ENST00000507142 NEIL2Q969S2 332 aa9.02□□□□□ -0.97
NEK1-203ENST00000507142 GAL3ST3Q96A11 431 aa9.02□□□□□ -0.97
NEK1-203ENST00000507142 COQ10AQ96MF6 247 aa9.02□□□□□ -0.97
NEK1-203ENST00000507142 COL21A1Q96P44 957 aa9.02□□□□□ -0.97
NEK1-203ENST00000507142 SLC38A2Q96QD8 506 aa9.02□□□□□ -0.97
NEK1-203ENST00000507142 S100A13Q99584 98 aa9.02□□□□□ -0.97
NEK1-203ENST00000507142 UTP23Q9BRU9 249 aaKnown RBP9.02□□□□□ -0.97
NEK1-203ENST00000507142 LRRC3Q9BY71 257 aa9.02□□□□□ -0.97
NEK1-203ENST00000507142 CCDC86Q9H6F5 360 aaKnown RBP9.02□□□□□ -0.97
NEK1-203ENST00000507142 SSU72Q9NP77 194 aaKnown RBP9.02□□□□□ -0.97
NEK1-203ENST00000507142 CUEDC1Q9NWM3 386 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms