RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 B3GALT2O43825 422 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 CHEK2O96017 543 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 IL10P22301 178 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 PTPN4P29074 926 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 SSR2P43308 183 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 OLR1P78380 273 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 HMGCS1Q01581 520 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 SRSF6Q13247 344 aaKnown RBP12.14□□□□□ -0.47
TCOF1-210ENST00000506767 MLIPQ5VWP3 458 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 MRM1Q6IN84 353 aaKnown RBP12.14□□□□□ -0.47
TCOF1-210ENST00000506767 RGS9BPQ6ZS82 235 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 SPACA3Q8IXA5 215 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 ENDOVQ8N8Q3 282 aaKnown RBP12.14□□□□□ -0.47
TCOF1-210ENST00000506767 STT3BQ8TCJ2 826 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 LRRC8CQ8TDW0 803 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 DYDC1Q8WWB3 177 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 KIAA1143Q96AT1 154 aaPredicted RBP12.14□□□□□ -0.47
TCOF1-210ENST00000506767 SPSB2Q99619 263 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 CCT7Q99832 543 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 EFHD1Q9BUP0 239 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 SORBS1Q9BX66 1292 aaKnown RBP12.14□□□□□ -0.47
TCOF1-210ENST00000506767 COPS7BQ9H9Q2 264 aaPredicted RBP12.14□□□□□ -0.47
TCOF1-210ENST00000506767 PRM3Q9NNZ6 103 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 PNPOQ9NVS9 261 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 AHSPQ9NZD4 102 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 KCMF1Q9P0J7 381 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 HCN3Q9P1Z3 774 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 TRPC4Q9UBN4 977 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 CTSFQ9UBX1 484 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 IL17BQ9UHF5 180 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 GPN3Q9UHW5 284 aaPredicted RBP12.14□□□□□ -0.47
TCOF1-210ENST00000506767 KCND3Q9UK17 655 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 DAPP1Q9UN19 280 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 RAXQ9Y2V3 346 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 PTGDR2Q9Y5Y4 395 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 CEP295Q9C0D2 2601 aa12.14□□□□□ -0.47
TCOF1-210ENST00000506767 A0A087WV48 116 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 A0A0A6YYD5 115 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 SRRM3A6NNA2 597 aaPredicted RBP12.13□□□□□ -0.47
TCOF1-210ENST00000506767 PIP5K1BO14986 540 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 RRP8O43159 456 aaKnown RBP12.13□□□□□ -0.47
TCOF1-210ENST00000506767 EEDO75530 441 aaKnown RBP12.13□□□□□ -0.47
TCOF1-210ENST00000506767 RSL1D1O76021 490 aaKnown RBP12.13□□□□□ -0.47
TCOF1-210ENST00000506767 BMP10O95393 424 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 RECKO95980 971 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 ZGLP1P0C6A0 271 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 LINC00032P0C843 101 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 CERS1P27544 350 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 TPP2P29144 1249 aaPredicted RBP12.13□□□□□ -0.47
TCOF1-210ENST00000506767 XCR1P46094 333 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 LIM2P55344 173 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 RPS15P62841 145 aaKnown RBP12.13□□□□□ -0.47
TCOF1-210ENST00000506767 OCA2Q04671 838 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 KIAA0040Q15053 153 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 VWA2Q5GFL6 755 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 XKR7Q5GH72 579 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 GALNT18Q6P9A2 607 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 COMMD6Q7Z4G1 85 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 VASH2Q86V25 355 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 NUDT13Q86X67 352 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 TMEM151BQ8IW70 566 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 ZC3H7AQ8IWR0 971 aaKnown RBP12.13□□□□□ -0.47
TCOF1-210ENST00000506767 OR2T11Q8NH01 316 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 APIPQ96GX9 242 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 METTL2AQ96IZ6 378 aaKnown RBP12.13□□□□□ -0.47
TCOF1-210ENST00000506767 SLC45A3Q96JT2 553 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 C7orf26Q96N11 449 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 OR1F2PQ96R84 312 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 CCNL2Q96S94 520 aaPredicted RBP12.13□□□□□ -0.47
TCOF1-210ENST00000506767 GPN2Q9H9Y4 310 aaPredicted RBP12.13□□□□□ -0.47
TCOF1-210ENST00000506767 LYRM4Q9HD34 91 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 C14orf105Q9NVL8 296 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 NXT1Q9UKK6 140 aaKnown RBP12.13□□□□□ -0.47
TCOF1-210ENST00000506767 TCFL5Q9UL49 500 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 ASB4Q9Y574 426 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 MRPS18BQ9Y676 258 aaKnown RBP12.13□□□□□ -0.47
TCOF1-210ENST00000506767 IGF2RP11717 2491 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 CCDC88CQ9P219 2028 aa12.13□□□□□ -0.47
TCOF1-210ENST00000506767 NUP210LQ5VU65 1888 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 CYR61O00622 381 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 LSM1O15116 133 aaKnown RBP12.12□□□□□ -0.47
TCOF1-210ENST00000506767 RGS14O43566 566 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 TMPRSS11DO60235 418 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 JUNP05412 331 aaKnown RBP12.12□□□□□ -0.47
TCOF1-210ENST00000506767 KLK1P06870 262 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 RNH1P13489 461 aaKnown RBP12.12□□□□□ -0.47
TCOF1-210ENST00000506767 WT1P19544 449 aaPredicted RBP12.12□□□□□ -0.47
TCOF1-210ENST00000506767 RAB38P57729 211 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 FOXL2P58012 376 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 RPS18P62269 152 aaKnown RBP12.12□□□□□ -0.47
TCOF1-210ENST00000506767 RAE1P78406 368 aaKnown RBP12.12□□□□□ -0.47
TCOF1-210ENST00000506767 TLE3Q04726 772 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 BTKQ06187 659 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 KLC1Q07866 573 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 SLAMF1Q13291 335 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 IMPG1Q17R60 797 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 SPIN4Q56A73 249 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 PAGE2Q7Z2X7 111 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 LAPTM4BQ86VI4 370 aa12.12□□□□□ -0.47
TCOF1-210ENST00000506767 DDIASQ8IXT1 998 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms