RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 FAM151BQ6UXP7 276 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 LRRC70Q7Z2Q7 622 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 GPR142Q7Z601 462 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 MRPL10Q7Z7H8 261 aaKnown RBP16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 C9orf62Q8N4C0 152 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 PROKR2Q8NFJ6 384 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 DNAJA4Q8WW22 397 aaPredicted RBP16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 UPRTQ96BW1 309 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 MARVELD1Q9BSK0 173 aa16.39■□□□□ 0.21
SQSTM1-211ENST00000506690 C17orf102A2RUQ5 167 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 WASHC1A8K0Z3 465 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 AP2A2O94973 939 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 PRAMEF1O95521 474 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 XCR1P46094 333 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 SLC9A3P48764 834 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 ARPP19P56211 112 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 GAB1Q13480 694 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 LIPKQ5VXJ0 399 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 FRG2Q64ET8 278 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 ESX1Q8N693 406 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 AQP11Q8NBQ7 271 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 HYLS1Q96M11 299 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 FRG2BQ96QU4 278 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 IL4I1Q96RQ9 567 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 DCLRE1CQ96SD1 692 aaKnown RBP16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 ZIC5Q96T25 663 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 HTATIP2Q9BUP3 242 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 DUSP26Q9BV47 211 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 RRAGCQ9HB90 399 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 PAK6Q9NQU5 681 aaPredicted RBP16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 BTNL2Q9UIR0 455 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 SNX11Q9Y5W9 270 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 DSPPQ9NZW4 1301 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 H3BNC9 293 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 GASTP01350 101 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 PDGFAP04085 211 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 SLC6A4P31645 630 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 GRK4P32298 578 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 RPIAP49247 311 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 IKZF1Q13422 519 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 ELOAQ14241 798 aaKnown RBP16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 TMEM201Q5SNT2 666 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 MZT2BQ6NZ67 158 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 ZNF782Q6ZMW2 699 aaPredicted RBP16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 RNF175Q8N4F7 328 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 OR9Q1Q8NGQ5 310 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 PIP5K1AQ99755 562 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 SOSTQ9BQB4 213 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 GPR63Q9BZJ6 419 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 PPP1R3EQ9H7J1 279 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 ARL15Q9NXU5 204 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 TMCC3Q9ULS5 477 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 CLCA3PQ9Y6N3 262 aa16.38■□□□□ 0.21
SQSTM1-211ENST00000506690 TRAV19A0A0A6YYK7 116 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 ARRDC5A6NEK1 342 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 PRAMEF4O60810 478 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 SLC43A1O75387 559 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 SLC2A2P11168 524 aaPredicted RBP16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 ATF6P18850 670 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 APEX1P27695 318 aaKnown RBP16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 PRAMEF9Q5VWM5 478 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 C19orf18Q8NEA5 215 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 QRFPRQ96P65 431 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 PTPN18Q99952 460 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 ANKRA2Q9H9E1 313 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 ARSBP15848 533 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 NAGAP17050 411 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 CTRB1P17538 263 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 EVI2BP34910 448 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 MVDP53602 400 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 CTRB2Q6GPI1 263 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 ZNF770Q6IQ21 691 aaPredicted RBP16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 MACC1Q6ZN28 852 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 LRRC20Q8TCA0 184 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 PIH1D2Q8WWB5 315 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 AP2M1Q96CW1 435 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 CCDC120Q96HB5 630 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 SLC6A18Q96N87 628 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 TCF25Q9BQ70 676 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 MED18Q9BUE0 208 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 ASB8Q9H765 288 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 GPATCH2Q9NW75 528 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 NLKQ9UBE8 527 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 NDOR1Q9UHB4 597 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 ELF5Q9UKW6 265 aaPredicted RBP16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 PCDHGB7Q9Y5F8 929 aa16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 ZFP37Q9Y6Q3 630 aaPredicted RBP16.37■□□□□ 0.21
SQSTM1-211ENST00000506690 TLR4O00206 839 aa16.36■□□□□ 0.21
SQSTM1-211ENST00000506690 SCAMP2O15127 329 aaKnown RBP16.36■□□□□ 0.21
SQSTM1-211ENST00000506690 PRKAR1AP10644 381 aa16.36■□□□□ 0.21
SQSTM1-211ENST00000506690 HOXC8P31273 242 aa16.36■□□□□ 0.21
SQSTM1-211ENST00000506690 RAB25P57735 213 aa16.36■□□□□ 0.21
SQSTM1-211ENST00000506690 ABATP80404 500 aa16.36■□□□□ 0.21
SQSTM1-211ENST00000506690 MRPS6P82932 125 aaKnown RBP16.36■□□□□ 0.21
SQSTM1-211ENST00000506690 TUSC3Q13454 348 aa16.36■□□□□ 0.21
SQSTM1-211ENST00000506690 NFATC2Q13469 925 aa16.36■□□□□ 0.21
SQSTM1-211ENST00000506690 WSCD2Q2TBF2 565 aa16.36■□□□□ 0.21
SQSTM1-211ENST00000506690 TRIQKQ629K1 86 aa16.36■□□□□ 0.21
SQSTM1-211ENST00000506690 C22orf42Q6IC83 251 aa16.36■□□□□ 0.21
SQSTM1-211ENST00000506690 NCEH1Q6PIU2 408 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms