RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 SNX31Q8N9S9 440 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 NOA1Q8NC60 698 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 TMEM52Q8NDY8 209 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 RHEBL1Q8TAI7 183 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 KCTD4Q8WVF5 259 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 EXT2Q93063 718 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 NXNL1Q96CM4 212 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 GPR78Q96P69 363 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 REXO4Q9GZR2 422 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 ACSS3Q9H6R3 686 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 PRDM7Q9NQW5 492 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 NINJ2Q9NZG7 142 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 ABI3Q9P2A4 366 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 PLEKHB1Q9UF11 243 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 DMGDHQ9UI17 866 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 PPIEQ9UNP9 301 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 ACOT9Q9Y305 439 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 A0A087X1B8 175 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 A0A088AWK7 358 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 GABRR3A8MPY1 467 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 SUPT3HB4E1H0 165 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 K7EPI3 171 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 UBXN8O00124 270 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 CYR61O00622 381 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 B3GALT2O43825 422 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 KLK8O60259 260 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 CCNT2O60583 730 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 SUPT3HO75486 399 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 NEURL1O76050 574 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 SCELO95171 688 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 RASAL1O95294 804 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 ALDOAP04075 364 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 S100BP04271 92 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 STSP08842 583 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 ZNF10P21506 573 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 MST1P26927 711 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 ECHS1P30084 290 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 HPDP32754 393 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 PHBP35232 272 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 CD96P40200 585 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 MAGEA12P43365 314 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 GPR143P51810 404 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 HNRNPFP52597 415 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 PLA2G16P53816 162 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 HSD17B7P56937 341 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 IRF9Q00978 393 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 IRF8Q02556 426 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 LAPTM5Q13571 262 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 NAA30Q147X3 362 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 TERF2Q15554 542 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 C4orf17Q53FE4 359 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 ZNF766Q5HY98 468 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 PAGE2BQ5JRK9 111 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 MROH9Q5TGP6 573 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 TRIM40Q6P9F5 258 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 CEP128Q6ZU80 1094 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 UBE3DQ7Z6J8 389 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 ZNF595Q8IYB9 648 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 KIF2BQ8N4N8 673 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 APCDD1LQ8NCL9 501 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 ARMC2Q8NEN0 867 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 DNAJB8Q8NHS0 232 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 SUN3Q8TAQ9 357 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 ADAMTS18Q8TE60 1221 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 ZNF473Q8WTR7 871 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 SLC44A1Q8WWI5 657 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 CCT6BQ92526 530 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 ISL2Q96A47 359 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 SCMH1Q96GD3 660 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 FAR2Q96K12 515 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 MAGEB10Q96LZ2 347 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 C5orf34Q96MH7 638 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 SIGLEC12Q96PQ1 595 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 F2RL3Q96RI0 385 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 SERINC2Q96SA4 455 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 MS4A8Q9BY19 250 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 CDC42EP4Q9H3Q1 356 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 TRIM45Q9H8W5 580 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 SNX15Q9NRS6 342 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 KCMF1Q9P0J7 381 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 METRNQ9UJH8 293 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 DAPP1Q9UN19 280 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 TSC22D4Q9Y3Q8 395 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 NOTCH2Q04721 2471 aa8.49□□□□□ -1.05
PDLIM5-209ENST00000506632 A0A096LPK6 155 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 ASPDHA6ND91 283 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 SYCE1LA8MT33 242 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 KLHL2O95198 593 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 CLDN1O95832 211 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 CRYABP02511 175 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 MYBL2P10244 700 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 CERS1P27544 350 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 SERPINB1P30740 379 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 TRHRP34981 398 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 MSH2P43246 934 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 MTTPP55157 894 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 LIM2P55344 173 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 MLF1P58340 268 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 TAS2R50P59544 299 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms