RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 TMEM156Q8N614 296 aa23.04■■□□□ 1.28
HERC4-212ENST00000505760 TSPAN17Q96FV3 270 aa23.04■■□□□ 1.28
HERC4-212ENST00000505760 VMP1Q96GC9 406 aa23.04■■□□□ 1.28
HERC4-212ENST00000505760 SEC16BQ96JE7 1060 aa23.04■■□□□ 1.28
HERC4-212ENST00000505760 PITHD1Q9GZP4 211 aaPredicted RBP23.04■■□□□ 1.28
HERC4-212ENST00000505760 CNOT10Q9H9A5 744 aaKnown RBP23.04■■□□□ 1.28
HERC4-212ENST00000505760 GPRC5BQ9NZH0 403 aa23.04■■□□□ 1.28
HERC4-212ENST00000505760 TXNDC16Q9P2K2 825 aa23.04■■□□□ 1.28
HERC4-212ENST00000505760 PDZD2O15018 2839 aa23.04■■□□□ 1.28
HERC4-212ENST00000505760 CSMD2Q7Z408 3487 aa23.03■■□□□ 1.28
HERC4-212ENST00000505760 KLRC4-KLRK1H3BQV0 150 aa23.03■■□□□ 1.28
HERC4-212ENST00000505760 PRRG2O14669 202 aa23.03■■□□□ 1.28
HERC4-212ENST00000505760 TFECO14948 347 aaPredicted RBP23.03■■□□□ 1.28
HERC4-212ENST00000505760 CLGNO14967 610 aa23.03■■□□□ 1.28
HERC4-212ENST00000505760 CLEC3AO75596 197 aa23.03■■□□□ 1.28
HERC4-212ENST00000505760 CLDN14O95500 239 aa23.03■■□□□ 1.28
HERC4-212ENST00000505760 MEOX1P50221 254 aa23.03■■□□□ 1.28
HERC4-212ENST00000505760 PLA2G16P53816 162 aa23.03■■□□□ 1.28
HERC4-212ENST00000505760 RAB38P57729 211 aa23.03■■□□□ 1.28
HERC4-212ENST00000505760 TRIM40Q6P9F5 258 aa23.03■■□□□ 1.28
HERC4-212ENST00000505760 GPSM1Q86YR5 675 aa23.03■■□□□ 1.28
HERC4-212ENST00000505760 SPATA6LQ8N4H0 392 aa23.03■■□□□ 1.28
HERC4-212ENST00000505760 BBOF1Q8ND07 529 aa23.03■■□□□ 1.28
HERC4-212ENST00000505760 PYROXD1Q8WU10 500 aa23.03■■□□□ 1.28
HERC4-212ENST00000505760 PHF12Q96QT6 1004 aa23.03■■□□□ 1.28
HERC4-212ENST00000505760 KRT12Q99456 494 aa23.03■■□□□ 1.28
HERC4-212ENST00000505760 CCDC77Q9BR77 488 aa23.03■■□□□ 1.28
HERC4-212ENST00000505760 MCMBPQ9BTE3 642 aa23.03■■□□□ 1.28
HERC4-212ENST00000505760 REXO4Q9GZR2 422 aaKnown RBP23.03■■□□□ 1.28
HERC4-212ENST00000505760 NT5DC2Q9H857 520 aa23.03■■□□□ 1.28
HERC4-212ENST00000505760 CAB39LQ9H9S4 337 aa23.03■■□□□ 1.28
HERC4-212ENST00000505760 DNAJC11Q9NVH1 559 aa23.03■■□□□ 1.28
HERC4-212ENST00000505760 MTO1Q9Y2Z2 717 aaKnown RBP23.03■■□□□ 1.28
HERC4-212ENST00000505760 ITGA10O75578 1167 aa23.02■■□□□ 1.28
HERC4-212ENST00000505760 CCDC166P0CW27 439 aa23.02■■□□□ 1.28
HERC4-212ENST00000505760 DOLPP1Q86YN1 238 aa23.02■■□□□ 1.28
HERC4-212ENST00000505760 SULF2Q8IWU5 870 aa23.02■■□□□ 1.28
HERC4-212ENST00000505760 EID3Q8N140 333 aa23.02■■□□□ 1.28
HERC4-212ENST00000505760 SNX31Q8N9S9 440 aa23.02■■□□□ 1.28
HERC4-212ENST00000505760 FAM47BQ8NA70 645 aa23.02■■□□□ 1.28
HERC4-212ENST00000505760 OR2L5Q8NG80 312 aa23.02■■□□□ 1.28
HERC4-212ENST00000505760 CDKL2Q92772 493 aa23.02■■□□□ 1.28
HERC4-212ENST00000505760 NCLNQ969V3 563 aa23.02■■□□□ 1.28
HERC4-212ENST00000505760 MTFMTQ96DP5 389 aaKnown RBP23.02■■□□□ 1.28
HERC4-212ENST00000505760 COPS7BQ9H9Q2 264 aaPredicted RBP23.02■■□□□ 1.28
HERC4-212ENST00000505760 SMYD2Q9NRG4 433 aa23.02■■□□□ 1.28
HERC4-212ENST00000505760 PPP2R1BP30154 601 aa23.01■■□□□ 1.27
HERC4-212ENST00000505760 PTGER1P34995 402 aa23.01■■□□□ 1.27
HERC4-212ENST00000505760 RFC3P40938 356 aa23.01■■□□□ 1.27
HERC4-212ENST00000505760 HNRNPFP52597 415 aaKnown RBP23.01■■□□□ 1.27
HERC4-212ENST00000505760 FBXO48Q5FWF7 155 aa23.01■■□□□ 1.27
HERC4-212ENST00000505760 C3P1Q6ZMU1 363 aa23.01■■□□□ 1.27
HERC4-212ENST00000505760 NCCRP1Q6ZVX7 275 aaPredicted RBP23.01■■□□□ 1.27
HERC4-212ENST00000505760 CHERPQ8IWX8 916 aaKnown RBP23.01■■□□□ 1.27
HERC4-212ENST00000505760 ZNF595Q8IYB9 648 aa23.01■■□□□ 1.27
HERC4-212ENST00000505760 TMEM52Q8NDY8 209 aa23.01■■□□□ 1.27
HERC4-212ENST00000505760 QRFPRQ96P65 431 aa23.01■■□□□ 1.27
HERC4-212ENST00000505760 TMEM79Q9BSE2 394 aa23.01■■□□□ 1.27
HERC4-212ENST00000505760 EHD1Q9H4M9 534 aa23.01■■□□□ 1.27
HERC4-212ENST00000505760 ADAP2Q9NPF8 381 aa23.01■■□□□ 1.27
HERC4-212ENST00000505760 PPIEQ9UNP9 301 aaKnown RBP23.01■■□□□ 1.27
HERC4-212ENST00000505760 ASB1Q9Y576 335 aa23.01■■□□□ 1.27
HERC4-212ENST00000505760 E9PLN8 166 aa23■■□□□ 1.27
HERC4-212ENST00000505760 TAPBPO15533 448 aa23■■□□□ 1.27
HERC4-212ENST00000505760 PHGDHO43175 533 aaKnown RBP23■■□□□ 1.27
HERC4-212ENST00000505760 PEX1O43933 1283 aa23■■□□□ 1.27
HERC4-212ENST00000505760 WISP3O95389 354 aaPredicted RBP23■■□□□ 1.27
HERC4-212ENST00000505760 SSTR1P30872 391 aa23■■□□□ 1.27
HERC4-212ENST00000505760 GGT5P36269 586 aa23■■□□□ 1.27
HERC4-212ENST00000505760 HSPA7P48741 367 aa23■■□□□ 1.27
HERC4-212ENST00000505760 SSR4P51571 173 aa23■■□□□ 1.27
HERC4-212ENST00000505760 TGM3Q08188 693 aa23■■□□□ 1.27
HERC4-212ENST00000505760 CALCOCO2Q13137 446 aa23■■□□□ 1.27
HERC4-212ENST00000505760 RCN2Q14257 317 aa23■■□□□ 1.27
HERC4-212ENST00000505760 CDSNQ15517 529 aa23■■□□□ 1.27
HERC4-212ENST00000505760 ADPRMQ3LIE5 342 aa23■■□□□ 1.27
HERC4-212ENST00000505760 XKR6Q5GH73 641 aa23■■□□□ 1.27
HERC4-212ENST00000505760 CDKL4Q5MAI5 379 aa23■■□□□ 1.27
HERC4-212ENST00000505760 SULT1C3Q6IMI6 304 aa23■■□□□ 1.27
HERC4-212ENST00000505760 CLNKQ7Z7G1 428 aa23■■□□□ 1.27
HERC4-212ENST00000505760 PHF10Q8WUB8 498 aaKnown RBP23■■□□□ 1.27
HERC4-212ENST00000505760 PTCD3Q96EY7 689 aaKnown RBP23■■□□□ 1.27
HERC4-212ENST00000505760 SERINC2Q96SA4 455 aa23■■□□□ 1.27
HERC4-212ENST00000505760 VKORC1Q9BQB6 163 aa23■■□□□ 1.27
HERC4-212ENST00000505760 PRM3Q9NNZ6 103 aa23■■□□□ 1.27
HERC4-212ENST00000505760 SAYSD1Q9NPB0 183 aa23■■□□□ 1.27
HERC4-212ENST00000505760 CD274Q9NZQ7 290 aa23■■□□□ 1.27
HERC4-212ENST00000505760 RNF14Q9UBS8 474 aa23■■□□□ 1.27
HERC4-212ENST00000505760 ZNF223Q9UK11 482 aaPredicted RBP23■■□□□ 1.27
HERC4-212ENST00000505760 ERVK-11Q9UQG0 969 aa23■■□□□ 1.27
HERC4-212ENST00000505760 YARS2Q9Y2Z4 477 aaKnown RBP23■■□□□ 1.27
HERC4-212ENST00000505760 CXorf49A8MYA2 514 aaPredicted RBP22.99■■□□□ 1.27
HERC4-212ENST00000505760 TGFBR3LH3BV60 316 aa22.99■■□□□ 1.27
HERC4-212ENST00000505760 CDC40O60508 579 aaKnown RBP eCLIP22.99■■□□□ 1.27
HERC4-212ENST00000505760 STK16O75716 305 aa22.99■■□□□ 1.27
HERC4-212ENST00000505760 ZFAND5O76080 213 aa22.99■■□□□ 1.27
HERC4-212ENST00000505760 IFNA16P05015 189 aa22.99■■□□□ 1.27
HERC4-212ENST00000505760 STMN1P16949 149 aa22.99■■□□□ 1.27
HERC4-212ENST00000505760 TFEBP19484 476 aa22.99■■□□□ 1.27
HERC4-212ENST00000505760 CERS1P27544 350 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms