RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 UPRTQ96BW1 309 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 QRFPRQ96P65 431 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 MRPL9Q9BYD2 267 aaKnown RBP7.31□□□□□ -1.24
NEDD9-208ENST00000504387 CHIAQ9BZP6 476 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 MIXL1Q9H2W2 232 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 CLN6Q9NWW5 311 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 NUDT4Q9NZJ9 180 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 CCDC59Q9P031 241 aaKnown RBP7.31□□□□□ -1.24
NEDD9-208ENST00000504387 IL20RAQ9UHF4 553 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 SPATA2Q9UM82 520 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 GRIP1Q9Y3R0 1128 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 PCDHGB2Q9Y5G2 931 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 TNPO3Q9Y5L0 923 aaKnown RBP7.31□□□□□ -1.24
NEDD9-208ENST00000504387 SNX11Q9Y5W9 270 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 DVL2O14641 736 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 MYL12BO14950 172 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 OR10H3O60404 316 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 CLDN7O95471 211 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 CH25HO95992 272 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 HBQ1P09105 142 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 MAP2K3P46734 347 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 ARHGDIBP52566 201 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 CLDN8P56748 225 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 PURAQ00577 322 aaKnown RBP7.31□□□□□ -1.24
NEDD9-208ENST00000504387 CSTF1Q05048 431 aaKnown RBP7.31□□□□□ -1.24
NEDD9-208ENST00000504387 GRB14Q14449 540 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 MBTPS1Q14703 1052 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 GPR68Q15743 365 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 RPS26P11Q5JNZ5 115 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-208ENST00000504387 CNIH2Q6PI25 160 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 PRSS55Q6UWB4 352 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-208ENST00000504387 MON1AQ86VX9 555 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 CCDC117Q8IWD4 279 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-208ENST00000504387 FBXL6Q8N531 539 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 ZFAND1Q8TCF1 268 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 RASSF5Q8WWW0 418 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 ZBED6CLQ96FA7 236 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-208ENST00000504387 RIPOR3Q96MK2 946 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 CCDC32Q9BV29 185 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 ADGRE3Q9BY15 652 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 MBD1Q9UIS9 605 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-208ENST00000504387 PIKFYVEQ9Y2I7 2098 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 TRBV5-3A0A0A0MS03 114 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 PRAMEF25A6NGN4 478 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 HRO43593 1189 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 UGT2B17O75795 530 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 GADD45GO95257 159 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 PROS1P07225 676 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 ELNP15502 786 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 CHMP24386 653 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 PTPN6P29350 595 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 ERP29P30040 261 aaKnown RBP7.31□□□□□ -1.24
NEDD9-208ENST00000504387 CD79BP40259 229 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 SRP9P49458 86 aaKnown RBP7.31□□□□□ -1.24
NEDD9-208ENST00000504387 RGS4P49798 205 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 ZNF81P51508 661 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 ZNF33AQ06730 810 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 CHIT1Q13231 466 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 FCN2Q15485 313 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 KCNA10Q16322 511 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 POM121L1PQ3SYA9 428 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 ESCO2Q56NI9 601 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 LAMTOR1Q6IAA8 161 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 DEF8Q6ZN54 512 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 LINC00299Q6ZSB3 139 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 CBLL1Q75N03 491 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 TSEN54Q7Z6J9 526 aaKnown RBP7.31□□□□□ -1.24
NEDD9-208ENST00000504387 RBM45Q8IUH3 476 aaKnown RBP7.31□□□□□ -1.24
NEDD9-208ENST00000504387 OR4A15Q8NGL6 344 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 ZNF431Q8TF32 576 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-208ENST00000504387 SMG7Q92540 1137 aaKnown RBP7.31□□□□□ -1.24
NEDD9-208ENST00000504387 CIDECQ96AQ7 238 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-208ENST00000504387 C7orf34Q96L11 122 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 RIMKLBQ9ULI2 386 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 PPIEQ9UNP9 301 aaKnown RBP7.31□□□□□ -1.24
NEDD9-208ENST00000504387 MAN2B2Q9Y2E5 1009 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 PCDHGA2Q9Y5H1 932 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 RLFQ13129 1914 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.3□□□□□ -1.24
NEDD9-208ENST00000504387 MBLAC1A4D2B0 266 aaPredicted RBP7.3□□□□□ -1.24
NEDD9-208ENST00000504387 IGLV3-25P01717 112 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 ALAS2P22557 587 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 SOX18P35713 384 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 NNMTP40261 264 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 MAGEA2P43356 314 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 ITGA1P56199 1179 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 RPS25P62851 125 aaKnown RBP7.3□□□□□ -1.24
NEDD9-208ENST00000504387 OLR1P78380 273 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 MEF2AQ02078 507 aaPredicted RBP7.3□□□□□ -1.24
NEDD9-208ENST00000504387 IL10RBQ08334 325 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 MAD2L1Q13257 205 aaPredicted RBP7.3□□□□□ -1.24
NEDD9-208ENST00000504387 ZNF177Q13360 481 aaPredicted RBP7.3□□□□□ -1.24
NEDD9-208ENST00000504387 TAF1AQ15573 450 aaPredicted RBP7.3□□□□□ -1.24
NEDD9-208ENST00000504387 DUOXA1Q1HG43 343 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 TIMM50Q3ZCQ8 353 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 SLC35F1Q5T1Q4 408 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 LCN1P1Q5VSP4 162 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 RNF219Q5W0B1 726 aaPredicted RBP7.3□□□□□ -1.24
NEDD9-208ENST00000504387 PLAG1Q6DJT9 500 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 ALG1LQ6GMV1 187 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms