RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 SRD5A1P18405 259 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 PPP2R1BP30154 601 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 ATP5OP48047 213 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 GPR143P51810 404 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 HK2P52789 917 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 KCNJ2P63252 427 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 FAM27E3Q08E93 113 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 ARHGAP19Q14CB8 494 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 HERC3Q15034 1050 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 SF3B4Q15427 424 aaKnown RBP eCLIP11.48□□□□□ -0.57
LSM6-204ENST00000504181 ALKBH5Q6P6C2 394 aaKnown RBP11.48□□□□□ -0.57
LSM6-204ENST00000504181 AFTPHQ6ULP2 937 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 PLXDC2Q6UX71 529 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 IL17RELQ6ZVW7 336 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 LDB1Q86U70 411 aaPredicted RBP11.48□□□□□ -0.57
LSM6-204ENST00000504181 PM20D2Q8IYS1 436 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 LRRC25Q8N386 305 aaPredicted RBP11.48□□□□□ -0.57
LSM6-204ENST00000504181 ARIH2OSQ8N7S6 290 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 PPM1NQ8N819 430 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 MARK4Q96L34 752 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 PANX3Q96QZ0 392 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 SFXN3Q9BWM7 321 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 ANGPTL4Q9BY76 406 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 KRTAP3-3Q9BYR6 98 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 KRTAP3-2Q9BYR7 98 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 RHBGQ9H310 441 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 TMEM184CQ9NVA4 438 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 TMEM160Q9NX00 188 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 BOKQ9UMX3 212 aaPredicted RBP11.48□□□□□ -0.57
LSM6-204ENST00000504181 MROH6A6NGR9 719 aa11.47□□□□□ -0.57
LSM6-204ENST00000504181 LRRC3CA6NJW4 275 aa11.47□□□□□ -0.57
LSM6-204ENST00000504181 E7ENX8 843 aa11.47□□□□□ -0.57
LSM6-204ENST00000504181 LCMT2O60294 686 aaKnown RBP11.47□□□□□ -0.57
LSM6-204ENST00000504181 MATN4O95460 622 aa11.47□□□□□ -0.57
LSM6-204ENST00000504181 SLC16A8O95907 504 aa11.47□□□□□ -0.57
LSM6-204ENST00000504181 PGRP06401 933 aa11.47□□□□□ -0.57
LSM6-204ENST00000504181 GDF1P27539 372 aa11.47□□□□□ -0.57
LSM6-204ENST00000504181 TAP2Q03519 686 aa11.47□□□□□ -0.57
LSM6-204ENST00000504181 TERF2Q15554 542 aa11.47□□□□□ -0.57
LSM6-204ENST00000504181 ETFDHQ16134 617 aa11.47□□□□□ -0.57
LSM6-204ENST00000504181 PRAMEF20Q5VT98 475 aa11.47□□□□□ -0.57
LSM6-204ENST00000504181 HIST2H2BDQ6DRA6 164 aa11.47□□□□□ -0.57
LSM6-204ENST00000504181 CAPN13Q6MZZ7 669 aaPredicted RBP11.47□□□□□ -0.57
LSM6-204ENST00000504181 ZNF550Q7Z398 422 aa11.47□□□□□ -0.57
LSM6-204ENST00000504181 MEX3DQ86XN8 651 aaKnown RBP11.47□□□□□ -0.57
LSM6-204ENST00000504181 ZNF740Q8NDX6 193 aa11.47□□□□□ -0.57
LSM6-204ENST00000504181 OR13J1Q8NGT2 312 aa11.47□□□□□ -0.57
LSM6-204ENST00000504181 ZNF480Q8WV37 535 aa11.47□□□□□ -0.57
LSM6-204ENST00000504181 LRRC45Q96CN5 670 aa11.47□□□□□ -0.57
LSM6-204ENST00000504181 LCORQ96JN0 433 aaPredicted RBP11.47□□□□□ -0.57
LSM6-204ENST00000504181 SGCZQ96LD1 299 aa11.47□□□□□ -0.57
LSM6-204ENST00000504181 JSRP1Q96MG2 331 aaPredicted RBP11.47□□□□□ -0.57
LSM6-204ENST00000504181 FERMT1Q9BQL6 677 aa11.47□□□□□ -0.57
LSM6-204ENST00000504181 ZFP64Q9NPA5 681 aa11.47□□□□□ -0.57
LSM6-204ENST00000504181 SLC2A6Q9UGQ3 507 aa11.47□□□□□ -0.57
LSM6-204ENST00000504181 LCMT1Q9UIC8 334 aa11.47□□□□□ -0.57
LSM6-204ENST00000504181 PPIEQ9UNP9 301 aaKnown RBP11.47□□□□□ -0.57
LSM6-204ENST00000504181 LRRC10BA6NIK2 292 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 ZNF839A8K0R7 811 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 A8MXE2 369 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 PSMD12O00232 456 aaPredicted RBP11.46□□□□□ -0.57
LSM6-204ENST00000504181 PRMT5O14744 637 aaPredicted RBP11.46□□□□□ -0.57
LSM6-204ENST00000504181 KPNA5O15131 536 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 TMCC2O75069 709 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 ADAM11O75078 769 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 PSMA3P25788 255 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 SLCO1A2P46721 670 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 DIO3P55073 304 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 P3H1Q32P28 736 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 FASTKD1Q53R41 847 aaKnown RBP11.46□□□□□ -0.57
LSM6-204ENST00000504181 DCST1Q5T197 706 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 LIPNQ5VXI9 398 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 ADGRD1Q6QNK2 874 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 SYDE1Q6ZW31 735 aaPredicted RBP11.46□□□□□ -0.57
LSM6-204ENST00000504181 ZNF534Q76KX8 674 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 GCNT2Q8N0V5 402 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 AFAP1L2Q8N4X5 818 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 OR4L1Q8NH43 312 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 SLC44A1Q8WWI5 657 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 ANKRD9Q96BM1 317 aaPredicted RBP11.46□□□□□ -0.57
LSM6-204ENST00000504181 INTS12Q96CB8 462 aaKnown RBP11.46□□□□□ -0.57
LSM6-204ENST00000504181 THAP11Q96EK4 314 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 FAM111AQ96PZ2 611 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 PACSIN1Q9BY11 444 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 SLCO5A1Q9H2Y9 848 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 CALHM2Q9HA72 323 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 HOMER3Q9NSC5 361 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 QPCTLQ9NXS2 382 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 DDX56Q9NY93 547 aaKnown RBP11.46□□□□□ -0.57
LSM6-204ENST00000504181 LAMP3Q9UQV4 416 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 SLC6A5Q9Y345 797 aa11.46□□□□□ -0.57
LSM6-204ENST00000504181 SERINC4A6NH21 518 aa11.45□□□□□ -0.58
LSM6-204ENST00000504181 LRATO95237 230 aa11.45□□□□□ -0.58
LSM6-204ENST00000504181 SYF2O95926 243 aaKnown RBP11.45□□□□□ -0.58
LSM6-204ENST00000504181 PLAUP00749 431 aa11.45□□□□□ -0.58
LSM6-204ENST00000504181 H2AFZP0C0S5 128 aa11.45□□□□□ -0.58
LSM6-204ENST00000504181 ZNF888P0CJ79 500 aaPredicted RBP11.45□□□□□ -0.58
LSM6-204ENST00000504181 ALOX12P18054 663 aa11.45□□□□□ -0.58
LSM6-204ENST00000504181 PPARGP37231 505 aaPredicted RBP11.45□□□□□ -0.58
LSM6-204ENST00000504181 CASP9P55211 416 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms