RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 CLDN1O95832 211 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 IGLV1-44P01699 117 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 ZNF883P0CG24 379 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 C8orf89P0DMQ9 161 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 GHRP10912 638 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 SFTPCP11686 197 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 ZNF26P17031 533 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 GOT1P17174 413 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 RBMS1P29558 406 aaKnown RBP2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 CTNNB1P35222 781 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 SOX3P41225 446 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 FRKP42685 505 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 IER3P46695 156 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 RABIFP47224 123 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 OR3A2P47893 321 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 HNMTP50135 292 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 XGP55808 180 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 NME5P56597 212 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 DCDC1P59894 354 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 CSNK2BP67870 215 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 CETN1Q12798 172 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 MRPL28Q13084 256 aaKnown RBP2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 CDH18Q13634 790 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 GAMTQ14353 236 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 EFTUD2Q15029 972 aaKnown RBP eCLIP2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 SGSM1Q2NKQ1 1148 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 HFEQ30201 348 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 ZFP69Q49AA0 526 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 FGD3Q5JSP0 725 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 ZNF772Q68DY9 489 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 PM20D1Q6GTS8 502 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 ZNF770Q6IQ21 691 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 KLHL10Q6JEL2 608 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 DHRS11Q6UWP2 260 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 C5orf24Q7Z6I8 188 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 SIAH3Q8IW03 269 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 CCDC83Q8IWF9 413 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 AQP12AQ8IXF9 295 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 KDM8Q8N371 416 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 AMER3Q8N944 861 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 ZNF248Q8NDW4 579 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 OR6S1Q8NH40 331 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 MAPK15Q8TD08 544 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 HCAR2Q8TDS4 363 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 ST7LQ8TDW4 575 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 GATAD1Q8WUU5 269 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 ZNRF4Q8WWF5 429 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 BCL2L2Q92843 193 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 C2orf48Q96LS8 159 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 CFAP53Q96M91 514 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 NEDD4LQ96PU5 975 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 C17orf62Q9BQA9 187 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 CLEC7AQ9BXN2 247 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 IDI2Q9BXS1 227 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 BARHL1Q9BZE3 327 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 NACAP1Q9BZK3 213 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 CUEDC2Q9H467 287 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 C5orf66Q9H5L9 145 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 AKIRIN1Q9H9L7 192 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 SLC35D1Q9NTN3 355 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 PLCXD1Q9NUJ7 323 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 PANK4Q9NVE7 773 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 TMOD3Q9NYL9 352 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 CGNQ9P2M7 1197 aaKnown RBP2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 RABL2AQ9UBK7 228 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 CACNG5Q9UF02 275 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 LAMP5Q9UJQ1 280 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 FBXL4Q9UKA2 621 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 PILRBQ9UKJ0 227 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 ELF5Q9UKW6 265 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 PPP1R3CQ9UQK1 317 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 ITM2BQ9Y287 266 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 NCKAP1Q9Y2A7 1128 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 TDRKHQ9Y2W6 561 aaKnown RBP2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 SELENOKQ9Y6D0 94 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 NPHP3Q7Z494 1330 aa2.11□□□□□ -2.07
HMGB1P35-201ENST00000503360 IGKV3D-15A0A087WSY6 115 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 SMIM30A4D0T7 59 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 ANKDD1BA6NHY2 528 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 C15orf61A6NNL5 157 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 CCDC169A6NNP5 214 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 GPR89AB7ZAQ6 455 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 ANGPT2O15123 496 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 TTI1O43156 1089 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 SCO2O43819 266 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 CYTIPO60759 359 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 ATP9AO75110 1047 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 SAP30O75446 220 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 ZNF821O75541 412 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 MT-ND2P03891 347 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 ABHD2P08910 425 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 GPR89BP0CG08 455 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 AADACP22760 399 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 AHCYP23526 432 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 CCND2P30279 289 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 SERPINB6P35237 376 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 OPRL1P41146 370 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 MAGEB1P43366 347 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 SLC6A12P48065 614 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms