RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 DPEP3Q9H4B8 488 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 DCLRE1BQ9H816 532 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 SIX2Q9NPC8 291 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 ZFP57Q9NU63 452 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 SOHLH2Q9NX45 425 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 RNF186Q9NXI6 227 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 ETV7Q9Y603 341 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 AP1M2Q9Y6Q5 423 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 NEO1Q92859 1461 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 TTC37Q6PGP7 1564 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 EFCAB5A4FU69 1503 aa4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.72□□□□□ -1.65
HMGB1P3-201ENST00000502802 OVOL3O00110 214 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 INSIG1O15503 277 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 CYTIPO60759 359 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 NOL3O60936 208 aaKnown RBP4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 SAP30O75446 220 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 OR6A2O95222 327 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 CPNE6O95741 557 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 CRYAAP02489 173 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 FGF3P11487 239 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 DNAJB1P25685 340 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 MAGEA11P43364 429 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 SLC6A12P48065 614 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 LBX1P52954 281 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 DCDC1P59894 354 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 POU3F1Q03052 451 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 MSLNQ13421 630 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 GPR50Q13585 617 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 DPYSQ14117 519 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 GRB14Q14449 540 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 FASTKD1Q53R41 847 aaKnown RBP4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 TCEAL6Q6IPX3 200 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 GALNT17Q6IS24 598 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 ABRAXAS1Q6UWZ7 409 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 GDPD4Q6W3E5 623 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 C17orf107Q6ZR85 190 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 CYP4V2Q6ZWL3 525 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 SYVN1Q86TM6 617 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 TRPT1Q86TN4 253 aaKnown RBP4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 STPG4Q8N801 248 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 CHURC1Q8WUH1 139 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 APOBEC4Q8WW27 367 aaKnown RBP4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 SYAP1Q96A49 352 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 VOPP1Q96AW1 172 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 ZBTB9Q96C00 473 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 BPIFA2Q96DR5 249 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 SENP5Q96HI0 755 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 C10orf90Q96M02 699 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 NEDD4LQ96PU5 975 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 COQ7Q99807 217 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 ASCL2Q99929 193 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 PIGQQ9BRB3 760 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 CCM2Q9BSQ5 444 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 PITPNM3Q9BZ71 974 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 VIPAS39Q9H9C1 493 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 HOMER3Q9NSC5 361 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 ACOXLQ9NUZ1 547 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 HACD3Q9P035 362 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 POLKQ9UBT6 870 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 PILRAQ9UKJ1 303 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 MRPS2Q9Y399 296 aaKnown RBP4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 MYO5CQ9NQX4 1742 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 MADDQ8WXG6 1647 aa4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 CDK13Q14004 1512 aaKnown RBP4.71□□□□□ -1.66
HMGB1P3-201ENST00000502802 CFAP74Q9C0B2 1584 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 CDC42BPBQ9Y5S2 1711 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 A0A087WUV0 522 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 TRBV4-1A0A0J9YWV2 114 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 ATP6AP2A0A1C7CYW4 349 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 EEF2KO00418 725 aaKnown RBP4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 ACOT8O14734 319 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 OGTO15294 1046 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 NME2P1O60361 137 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 AKR7A3O95154 331 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 IFNB1P01574 187 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 SNHG28P0DPA3 235 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 PRKAR1AP10644 381 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 SLC2A2P11168 524 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 CTNNA2P26232 953 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 AKT2P31751 481 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 OR1D2P34982 312 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 TKTL1P51854 596 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 HERV-K104P63124 156 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 SP3Q02447 781 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 SRSF9Q13242 221 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 CEBPEQ15744 281 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 CARTPTQ16568 116 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 ZNF74Q16587 644 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 DUSP5Q16690 384 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 KIAA1644Q3SXP7 199 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 LRRC37A5PQ49AS3 106 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 SNRNP48Q6IEG0 339 aaKnown RBP4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 IRGCQ6NXR0 463 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 LEKR1Q6ZMV7 388 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 ZNF771Q7L3S4 317 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 CCDC185Q8N715 623 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 TCEANCQ8N8B7 351 aa4.7□□□□□ -1.66
HMGB1P3-201ENST00000502802 NIPA2Q8N8Q9 360 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms