RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 SERPINB5P36952 375 aa11.78□□□□□ -0.52
TRA2A-209ENST00000494255 TSFMP43897 325 aaKnown RBP11.78□□□□□ -0.52
TRA2A-209ENST00000494255 CCR10P46092 362 aa11.78□□□□□ -0.52
TRA2A-209ENST00000494255 RRADP55042 308 aa11.78□□□□□ -0.52
TRA2A-209ENST00000494255 ZNF33BQ06732 778 aa11.78□□□□□ -0.52
TRA2A-209ENST00000494255 TUBB8Q3ZCM7 444 aa11.78□□□□□ -0.52
TRA2A-209ENST00000494255 BORAQ6PGQ7 559 aa11.78□□□□□ -0.52
TRA2A-209ENST00000494255 UBE3DQ7Z6J8 389 aa11.78□□□□□ -0.52
TRA2A-209ENST00000494255 LAPTM4BQ86VI4 370 aa11.78□□□□□ -0.52
TRA2A-209ENST00000494255 HOMEZQ8IX15 550 aa11.78□□□□□ -0.52
TRA2A-209ENST00000494255 CA13Q8N1Q1 262 aa11.78□□□□□ -0.52
TRA2A-209ENST00000494255 APOBEC4Q8WW27 367 aaKnown RBP11.78□□□□□ -0.52
TRA2A-209ENST00000494255 METTL21AQ8WXB1 218 aa11.78□□□□□ -0.52
TRA2A-209ENST00000494255 PAIP2Q9BPZ3 127 aaKnown RBP11.78□□□□□ -0.52
TRA2A-209ENST00000494255 RBCK1Q9BYM8 510 aa11.78□□□□□ -0.52
TRA2A-209ENST00000494255 SHCBP1LQ9BZQ2 653 aa11.78□□□□□ -0.52
TRA2A-209ENST00000494255 FARSBQ9NSD9 589 aaKnown RBP11.78□□□□□ -0.52
TRA2A-209ENST00000494255 NKIRAS1Q9NYS0 192 aa11.78□□□□□ -0.52
TRA2A-209ENST00000494255 SLC12A4Q9UP95 1085 aa11.78□□□□□ -0.52
TRA2A-209ENST00000494255 TIMM22Q9Y584 194 aa11.78□□□□□ -0.52
TRA2A-209ENST00000494255 SPACA6W5XKT8 324 aa11.78□□□□□ -0.52
TRA2A-209ENST00000494255 NUP210LQ5VU65 1888 aa11.77□□□□□ -0.53
TRA2A-209ENST00000494255 WDR91A4D1P6 747 aa11.77□□□□□ -0.53
TRA2A-209ENST00000494255 RTCAO00442 366 aaKnown RBP11.77□□□□□ -0.53
TRA2A-209ENST00000494255 PLPP1O14494 284 aa11.77□□□□□ -0.53
TRA2A-209ENST00000494255 DNAJB6O75190 326 aa11.77□□□□□ -0.53
TRA2A-209ENST00000494255 SEMA3DO95025 777 aa11.77□□□□□ -0.53
TRA2A-209ENST00000494255 HIST1H1TP22492 207 aaPredicted RBP11.77□□□□□ -0.53
TRA2A-209ENST00000494255 RAB38P57729 211 aa11.77□□□□□ -0.53
TRA2A-209ENST00000494255 CSTF3Q12996 717 aaKnown RBP11.77□□□□□ -0.53
TRA2A-209ENST00000494255 ATP1A4Q13733 1029 aa11.77□□□□□ -0.53
TRA2A-209ENST00000494255 RUNX2Q13950 521 aa11.77□□□□□ -0.53
TRA2A-209ENST00000494255 TBR1Q16650 682 aa11.77□□□□□ -0.53
TRA2A-209ENST00000494255 TCHHL1Q5QJ38 904 aaPredicted RBP11.77□□□□□ -0.53
TRA2A-209ENST00000494255 FAAH2Q6GMR7 532 aa11.77□□□□□ -0.53
TRA2A-209ENST00000494255 ZCCHC23Q6ZST2 131 aa11.77□□□□□ -0.53
TRA2A-209ENST00000494255 PAGE2Q7Z2X7 111 aa11.77□□□□□ -0.53
TRA2A-209ENST00000494255 PPP1R32Q7Z5V6 425 aa11.77□□□□□ -0.53
TRA2A-209ENST00000494255 ACOT4Q8N9L9 421 aa11.77□□□□□ -0.53
TRA2A-209ENST00000494255 ARL8AQ96BM9 186 aa11.77□□□□□ -0.53
TRA2A-209ENST00000494255 ATP6V1G3Q96LB4 118 aa11.77□□□□□ -0.53
TRA2A-209ENST00000494255 FER1L6-AS2Q96M78 137 aa11.77□□□□□ -0.53
TRA2A-209ENST00000494255 ARHGAP9Q9BRR9 750 aa11.77□□□□□ -0.53
TRA2A-209ENST00000494255 VN1R1Q9GZP7 353 aa11.77□□□□□ -0.53
TRA2A-209ENST00000494255 LYRM4Q9HD34 91 aa11.77□□□□□ -0.53
TRA2A-209ENST00000494255 P4HTMQ9NXG6 502 aa11.77□□□□□ -0.53
TRA2A-209ENST00000494255 MRPS33Q9Y291 106 aaKnown RBP11.77□□□□□ -0.53
TRA2A-209ENST00000494255 ASPMQ8IZT6 3477 aa11.77□□□□□ -0.53
TRA2A-209ENST00000494255 B4GALT2O60909 372 aa11.76□□□□□ -0.53
TRA2A-209ENST00000494255 ALOX12BO75342 701 aa11.76□□□□□ -0.53
TRA2A-209ENST00000494255 CDC123O75794 336 aaPredicted RBP11.76□□□□□ -0.53
TRA2A-209ENST00000494255 SCELO95171 688 aa11.76□□□□□ -0.53
TRA2A-209ENST00000494255 ETHE1O95571 254 aa11.76□□□□□ -0.53
TRA2A-209ENST00000494255 CHEK2O96017 543 aa11.76□□□□□ -0.53
TRA2A-209ENST00000494255 SERPINE1P05121 402 aa11.76□□□□□ -0.53
TRA2A-209ENST00000494255 DHRS4L1P0CG22 281 aa11.76□□□□□ -0.53
TRA2A-209ENST00000494255 UROSP10746 265 aa11.76□□□□□ -0.53
TRA2A-209ENST00000494255 ACPPP15309 386 aa11.76□□□□□ -0.53
TRA2A-209ENST00000494255 GALNT1Q10472 559 aaPredicted RBP11.76□□□□□ -0.53
TRA2A-209ENST00000494255 MPP2Q14168 576 aa11.76□□□□□ -0.53
TRA2A-209ENST00000494255 CHI3L2Q15782 390 aa11.76□□□□□ -0.53
TRA2A-209ENST00000494255 ARL13AQ5H913 290 aaPredicted RBP11.76□□□□□ -0.53
TRA2A-209ENST00000494255 CYP20A1Q6UW02 462 aa11.76□□□□□ -0.53
TRA2A-209ENST00000494255 ZNF793Q6ZN11 406 aa11.76□□□□□ -0.53
TRA2A-209ENST00000494255 MED25Q71SY5 747 aa11.76□□□□□ -0.53
TRA2A-209ENST00000494255 CUZD1Q86UP6 607 aa11.76□□□□□ -0.53
TRA2A-209ENST00000494255 NUDT13Q86X67 352 aa11.76□□□□□ -0.53
TRA2A-209ENST00000494255 TMEM151BQ8IW70 566 aa11.76□□□□□ -0.53
TRA2A-209ENST00000494255 GBP7Q8N8V2 638 aaPredicted RBP11.76□□□□□ -0.53
TRA2A-209ENST00000494255 TMEM102Q8N9M5 508 aaPredicted RBP11.76□□□□□ -0.53
TRA2A-209ENST00000494255 EXTL1Q92935 676 aa11.76□□□□□ -0.53
TRA2A-209ENST00000494255 KCNA7Q96RP8 456 aa11.76□□□□□ -0.53
TRA2A-209ENST00000494255 HBEGFQ99075 208 aa11.76□□□□□ -0.53
TRA2A-209ENST00000494255 C19orf25Q9UFG5 118 aaPredicted RBP11.76□□□□□ -0.53
TRA2A-209ENST00000494255 DAPP1Q9UN19 280 aa11.76□□□□□ -0.53
TRA2A-209ENST00000494255 KCNMB2Q9Y691 235 aa11.76□□□□□ -0.53
TRA2A-209ENST00000494255 CACNA1BQ00975 2339 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 ARHGAP10A1A4S6 786 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 ARGFXA6NJG6 315 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 CLDN4O14493 209 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 SOCS6O14544 535 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 AZIN1O14977 448 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 PRMT3O60678 531 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 C8orf89P0DMQ9 161 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 HTR6P50406 440 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 SLC18A1P54219 525 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 FOXA1P55317 472 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 LIM2P55344 173 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 SLAMF1Q13291 335 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 IMPG1Q17R60 797 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 ZCCHC7Q8N3Z6 543 aaKnown RBP11.75□□□□□ -0.53
TRA2A-209ENST00000494255 EFCAB3Q8N7B9 438 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 FAM47BQ8NA70 645 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 MGARPQ8TDB4 240 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 SH3GL2Q99962 352 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 SORBS1Q9BX66 1292 aaKnown RBP11.75□□□□□ -0.53
TRA2A-209ENST00000494255 MRPL1Q9BYD6 325 aaKnown RBP11.75□□□□□ -0.53
TRA2A-209ENST00000494255 MLXIPLQ9NP71 852 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 LANCL2Q9NS86 450 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 LYARQ9NX58 379 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms