RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 LBX1P52954 281 aa3.1□□□□□ -1.91
CD46-217ENST00000493796 IFI35P80217 286 aaPredicted RBP3.1□□□□□ -1.91
CD46-217ENST00000493796 ELAVL2Q12926 359 aaKnown RBP3.1□□□□□ -1.91
CD46-217ENST00000493796 CUL3Q13618 768 aa3.1□□□□□ -1.91
CD46-217ENST00000493796 VEZF1Q14119 521 aa3.1□□□□□ -1.91
CD46-217ENST00000493796 FASTKD3Q14CZ7 662 aaKnown RBP3.1□□□□□ -1.91
CD46-217ENST00000493796 EFTUD2Q15029 972 aaKnown RBP eCLIP3.1□□□□□ -1.914e-7■■■■■ 43.2
CD46-217ENST00000493796 DEFB115Q30KQ5 88 aa3.1□□□□□ -1.91
CD46-217ENST00000493796 TCTEX1D4Q5JR98 221 aa3.1□□□□□ -1.91
CD46-217ENST00000493796 LEKR1Q6ZMV7 388 aa3.1□□□□□ -1.91
CD46-217ENST00000493796 ERO1BQ86YB8 467 aa3.1□□□□□ -1.91
CD46-217ENST00000493796 APOBEC3FQ8IUX4 373 aaKnown RBP3.1□□□□□ -1.91
CD46-217ENST00000493796 NDUFAF2Q8N183 169 aa3.1□□□□□ -1.91
CD46-217ENST00000493796 FBXL16Q8N461 479 aa3.1□□□□□ -1.91
CD46-217ENST00000493796 OR10Q1Q8NGQ4 319 aa3.1□□□□□ -1.91
CD46-217ENST00000493796 CRYGNQ8WXF5 182 aa3.1□□□□□ -1.91
CD46-217ENST00000493796 FAM71F1Q96KD3 344 aaPredicted RBP3.1□□□□□ -1.91
CD46-217ENST00000493796 C12orf42Q96LP6 360 aa3.1□□□□□ -1.91
CD46-217ENST00000493796 CCDC3Q9BQI4 270 aa3.1□□□□□ -1.91
CD46-217ENST00000493796 GPATCH1Q9BRR8 931 aaKnown RBP3.1□□□□□ -1.91
CD46-217ENST00000493796 ZMYND12Q9H0C1 365 aa3.1□□□□□ -1.91
CD46-217ENST00000493796 ALDH8A1Q9H2A2 487 aaPredicted RBP3.1□□□□□ -1.91
CD46-217ENST00000493796 RPAP3Q9H6T3 665 aaPredicted RBP3.1□□□□□ -1.91
CD46-217ENST00000493796 VCPKMTQ9H867 229 aa3.1□□□□□ -1.91
CD46-217ENST00000493796 MED20Q9H944 212 aa3.1□□□□□ -1.91
CD46-217ENST00000493796 CNOT10Q9H9A5 744 aaKnown RBP3.1□□□□□ -1.91
CD46-217ENST00000493796 RAVER2Q9HCJ3 691 aaKnown RBP3.1□□□□□ -1.91
CD46-217ENST00000493796 VAT1LQ9HCJ6 419 aa3.1□□□□□ -1.91
CD46-217ENST00000493796 RPS10P5Q9NQ39 176 aa3.1□□□□□ -1.91
CD46-217ENST00000493796 MORF4L1Q9UBU8 362 aa3.1□□□□□ -1.91
CD46-217ENST00000493796 CPSF3Q9UKF6 684 aaKnown RBP3.1□□□□□ -1.91
CD46-217ENST00000493796 FAM169AQ9Y6X4 670 aa3.1□□□□□ -1.91
CD46-217ENST00000493796 R4GN57 208 aa3.1□□□□□ -1.91
CD46-217ENST00000493796 NID2Q14112 1375 aa3.1□□□□□ -1.91
CD46-217ENST00000493796 TET1Q8NFU7 2136 aa3.1□□□□□ -1.91
CD46-217ENST00000493796 TRIOO75962 3097 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 IGHV3OR16-10A0A075B7F0 116 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 CCL15-CCL14A0A0B4J2E2 113 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 KLF18A0A0U1RQI7 1052 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 EDDM13A0A1B0GTR0 161 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 SNURFLB1AK76 121 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 H0YAE9 185 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 PDHXO00330 501 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 MPHOSPH10O00566 681 aaKnown RBP3.09□□□□□ -1.91
CD46-217ENST00000493796 FPGTO14772 594 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 IFIT3O14879 490 aaKnown RBP3.09□□□□□ -1.91
CD46-217ENST00000493796 IDH3BO43837 385 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 PFKFB2O60825 505 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 KRT33AO76009 404 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 PGK2P07205 417 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 CD22P20273 847 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 ASCL1P50553 236 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 TMEM50BP56557 158 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 PPIL2Q13356 520 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 RAPSNQ13702 412 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 SNTB1Q13884 538 aaKnown RBP3.09□□□□□ -1.91
CD46-217ENST00000493796 PTPRCAPQ14761 206 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 MTF1Q14872 753 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 EXT1Q16394 746 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 ZNF239Q16600 458 aaKnown RBP3.09□□□□□ -1.91
CD46-217ENST00000493796 CCL15Q16663 113 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 UBE2SQ16763 222 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 VWC2Q2TAL6 325 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 QRICH1Q2TAL8 776 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 MOGAT2Q3SYC2 334 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 ZSCAN25Q6NSZ9 544 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 ZNF343Q6P1L6 599 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 CFAP161Q6P656 301 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 P2RY8Q86VZ1 359 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 CATSPERDQ86XM0 798 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 CCDC83Q8IWF9 413 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 C4orf32Q8N8J7 132 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 AMER3Q8N944 861 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 Q8NBF4 154 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 SLC37A3Q8NCC5 494 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 NUP37Q8NFH4 326 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 PRICKLE1Q96MT3 831 aaPredicted RBP3.09□□□□□ -1.91
CD46-217ENST00000493796 SPAG5Q96R06 1193 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 TAAR1Q96RJ0 339 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 LPAR4Q99677 370 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 TMX4Q9H1E5 349 aaPredicted RBP3.09□□□□□ -1.91
CD46-217ENST00000493796 CDH20Q9HBT6 801 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 PDRG1Q9NUG6 133 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 TEX10Q9NXF1 929 aaPredicted RBP3.09□□□□□ -1.91
CD46-217ENST00000493796 CSAG2Q9Y5P2 127 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 TRPV2Q9Y5S1 764 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 CSNK1G3Q9Y6M4 447 aa3.09□□□□□ -1.91
CD46-217ENST00000493796 ARID2Q68CP9 1835 aa3.09□□□□□ -1.92
CD46-217ENST00000493796 ZNF236Q9UL36 1845 aa3.09□□□□□ -1.92
CD46-217ENST00000493796 A0A087WUV0 522 aaPredicted RBP3.08□□□□□ -1.92
CD46-217ENST00000493796 TRBV5-5A0A0J9YX44 114 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 A0A1W2PPK0 400 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 CASTOR2A6NHX0 329 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 TSPY2A6NKD2 308 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 K7ENM7 598 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 CXCL11O14625 94 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 TEX28O15482 410 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 SPRY1O43609 319 aaPredicted RBP3.08□□□□□ -1.92
CD46-217ENST00000493796 ATP9AO75110 1047 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 C22orf31O95567 290 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms