RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 C1orf50Q9BV19 199 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 EBPLQ9BY08 206 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 LYRM4Q9HD34 91 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 MRGBPQ9NV56 204 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 NDOR1Q9UHB4 597 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 PHF11Q9UIL8 331 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 DLGAP4Q9Y2H0 992 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 WBP11Q9Y2W2 641 aaKnown RBP17.65■□□□□ 0.42
MCF2L-230ENST00000491028 B3GALT1Q9Y5Z6 326 aa17.65■□□□□ 0.42
MCF2L-230ENST00000491028 PMS2P1A4D2B8 440 aa17.64■□□□□ 0.41
MCF2L-230ENST00000491028 GUCY1B2O75343 617 aa17.64■□□□□ 0.41
MCF2L-230ENST00000491028 B3GALT4O96024 378 aa17.64■□□□□ 0.41
MCF2L-230ENST00000491028 BCKDHAP12694 445 aa17.64■□□□□ 0.41
MCF2L-230ENST00000491028 SDC1P18827 310 aa17.64■□□□□ 0.41
MCF2L-230ENST00000491028 ALAS2P22557 587 aa17.64■□□□□ 0.41
MCF2L-230ENST00000491028 ASMTP46597 345 aa17.64■□□□□ 0.41
MCF2L-230ENST00000491028 GABREP78334 506 aa17.64■□□□□ 0.41
MCF2L-230ENST00000491028 SLAMF1Q13291 335 aa17.64■□□□□ 0.41
MCF2L-230ENST00000491028 TMEM198Q66K66 360 aa17.64■□□□□ 0.41
MCF2L-230ENST00000491028 ADAMTS18Q8TE60 1221 aa17.64■□□□□ 0.41
MCF2L-230ENST00000491028 PMEPA1Q969W9 287 aa17.64■□□□□ 0.41
MCF2L-230ENST00000491028 GBP5Q96PP8 586 aa17.64■□□□□ 0.41
MCF2L-230ENST00000491028 ULBP3Q9BZM4 244 aa17.64■□□□□ 0.41
MCF2L-230ENST00000491028 MYNNQ9NPC7 610 aa17.64■□□□□ 0.41
MCF2L-230ENST00000491028 MS4A12Q9NXJ0 267 aa17.64■□□□□ 0.41
MCF2L-230ENST00000491028 SPTBP11277 2137 aa17.63■□□□□ 0.41
MCF2L-230ENST00000491028 ZNF860A6NHJ4 632 aa17.63■□□□□ 0.41
MCF2L-230ENST00000491028 C9orf172C9J069 976 aa17.63■□□□□ 0.41
MCF2L-230ENST00000491028 SGK494L7N484 410 aa17.63■□□□□ 0.41
MCF2L-230ENST00000491028 TMPRSS11DO60235 418 aa17.63■□□□□ 0.41
MCF2L-230ENST00000491028 RDH16O75452 317 aa17.63■□□□□ 0.41
MCF2L-230ENST00000491028 KIAA0754O94854 1291 aa17.63■□□□□ 0.41
MCF2L-230ENST00000491028 TNFSF15O95150 251 aa17.63■□□□□ 0.41
MCF2L-230ENST00000491028 GBAP04062 536 aa17.63■□□□□ 0.41
MCF2L-230ENST00000491028 FAM58BPP0C7Q3 252 aa17.63■□□□□ 0.41
MCF2L-230ENST00000491028 RORAP35398 523 aa17.63■□□□□ 0.41
MCF2L-230ENST00000491028 MRPL19P49406 292 aaKnown RBP17.63■□□□□ 0.41
MCF2L-230ENST00000491028 ATP4BP51164 291 aa17.63■□□□□ 0.41
MCF2L-230ENST00000491028 DIO3P55073 304 aa17.63■□□□□ 0.41
MCF2L-230ENST00000491028 DSG2Q14126 1118 aa17.63■□□□□ 0.41
MCF2L-230ENST00000491028 IKBIPQ70UQ0 350 aa17.63■□□□□ 0.41
MCF2L-230ENST00000491028 LIX1Q8N485 282 aa17.63■□□□□ 0.41
MCF2L-230ENST00000491028 ANKS4BQ8N8V4 417 aa17.63■□□□□ 0.41
MCF2L-230ENST00000491028 AMER3Q8N944 861 aa17.63■□□□□ 0.41
MCF2L-230ENST00000491028 CCDC197Q8NCU1 140 aa17.63■□□□□ 0.41
MCF2L-230ENST00000491028 DPH2Q9BQC3 489 aaPredicted RBP17.63■□□□□ 0.41
MCF2L-230ENST00000491028 BRINP2Q9C0B6 783 aa17.63■□□□□ 0.41
MCF2L-230ENST00000491028 NRSN2Q9GZP1 204 aa17.63■□□□□ 0.41
MCF2L-230ENST00000491028 ZNF304Q9HCX3 659 aa17.63■□□□□ 0.41
MCF2L-230ENST00000491028 DAPP1Q9UN19 280 aa17.63■□□□□ 0.41
MCF2L-230ENST00000491028 SPACA6W5XKT8 324 aa17.63■□□□□ 0.41
MCF2L-230ENST00000491028 CNOT1A5YKK6 2376 aaKnown RBP17.63■□□□□ 0.41
MCF2L-230ENST00000491028 SCN3AQ9NY46 2000 aa17.62■□□□□ 0.41
MCF2L-230ENST00000491028 NVLO15381 856 aaKnown RBP17.62■□□□□ 0.41
MCF2L-230ENST00000491028 ONECUT2O95948 504 aa17.62■□□□□ 0.41
MCF2L-230ENST00000491028 NTRK1P04629 796 aa17.62■□□□□ 0.41
MCF2L-230ENST00000491028 PIM1P11309 404 aaPredicted RBP17.62■□□□□ 0.41
MCF2L-230ENST00000491028 G6PDP11413 515 aa17.62■□□□□ 0.41
MCF2L-230ENST00000491028 ZNF28P17035 718 aa17.62■□□□□ 0.41
MCF2L-230ENST00000491028 NCF2P19878 526 aaPredicted RBP17.62■□□□□ 0.41
MCF2L-230ENST00000491028 FBLP22087 321 aaKnown RBP17.62■□□□□ 0.41
MCF2L-230ENST00000491028 LIM2P55344 173 aa17.62■□□□□ 0.41
MCF2L-230ENST00000491028 RAB38P57729 211 aa17.62■□□□□ 0.41
MCF2L-230ENST00000491028 STX1BP61266 288 aa17.62■□□□□ 0.41
MCF2L-230ENST00000491028 ABHD18Q0P651 414 aa17.62■□□□□ 0.41
MCF2L-230ENST00000491028 PDCD4Q53EL6 469 aaKnown RBP17.62■□□□□ 0.41
MCF2L-230ENST00000491028 ZNF385CQ66K41 422 aaPredicted RBP17.62■□□□□ 0.41
MCF2L-230ENST00000491028 GPR180Q86V85 440 aa17.62■□□□□ 0.41
MCF2L-230ENST00000491028 DSELQ8IZU8 1212 aa17.62■□□□□ 0.41
MCF2L-230ENST00000491028 CA13Q8N1Q1 262 aa17.62■□□□□ 0.41
MCF2L-230ENST00000491028 DTWD1Q8N5C7 304 aa17.62■□□□□ 0.41
MCF2L-230ENST00000491028 SLC38A9Q8NBW4 561 aa17.62■□□□□ 0.41
MCF2L-230ENST00000491028 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.62■□□□□ 0.41
MCF2L-230ENST00000491028 C16orf78Q8WTQ4 265 aa17.62■□□□□ 0.41
MCF2L-230ENST00000491028 CATSPER2Q96P56 530 aa17.62■□□□□ 0.41
MCF2L-230ENST00000491028 HEY2Q9UBP5 337 aa17.62■□□□□ 0.41
MCF2L-230ENST00000491028 MAPRE3Q9UPY8 281 aa17.62■□□□□ 0.41
MCF2L-230ENST00000491028 MAP4K5Q9Y4K4 846 aa17.62■□□□□ 0.41
MCF2L-230ENST00000491028 TMEM184BQ9Y519 407 aaPredicted RBP17.62■□□□□ 0.41
MCF2L-230ENST00000491028 ASB4Q9Y574 426 aa17.62■□□□□ 0.41
MCF2L-230ENST00000491028 PCDHGA7Q9Y5G6 932 aa17.62■□□□□ 0.41
MCF2L-230ENST00000491028 GPR45Q9Y5Y3 372 aa17.62■□□□□ 0.41
MCF2L-230ENST00000491028 CFAP54Q96N23 3096 aa17.62■□□□□ 0.41
MCF2L-230ENST00000491028 PRMT3O60678 531 aa17.61■□□□□ 0.41
MCF2L-230ENST00000491028 CCDC22O60826 627 aa17.61■□□□□ 0.41
MCF2L-230ENST00000491028 STK17BO94768 372 aa17.61■□□□□ 0.41
MCF2L-230ENST00000491028 DLGAP3O95886 979 aa17.61■□□□□ 0.41
MCF2L-230ENST00000491028 KLK3P07288 261 aaPredicted RBP17.61■□□□□ 0.41
MCF2L-230ENST00000491028 RNH1P13489 461 aaKnown RBP17.61■□□□□ 0.41
MCF2L-230ENST00000491028 ITGAXP20702 1163 aa17.61■□□□□ 0.41
MCF2L-230ENST00000491028 AGXTP21549 392 aa17.61■□□□□ 0.41
MCF2L-230ENST00000491028 IL10P22301 178 aa17.61■□□□□ 0.41
MCF2L-230ENST00000491028 TACR1P25103 407 aa17.61■□□□□ 0.41
MCF2L-230ENST00000491028 RBMS1P29558 406 aaKnown RBP17.61■□□□□ 0.41
MCF2L-230ENST00000491028 BUD31P41223 144 aaPredicted RBP17.61■□□□□ 0.41
MCF2L-230ENST00000491028 ID4P47928 161 aa17.61■□□□□ 0.41
MCF2L-230ENST00000491028 HNRNPH2P55795 449 aaKnown RBP17.61■□□□□ 0.41
MCF2L-230ENST00000491028 TAS2R50P59544 299 aa17.61■□□□□ 0.41
MCF2L-230ENST00000491028 DCDP81605 110 aaKnown RBP17.61■□□□□ 0.41
MCF2L-230ENST00000491028 KLC1Q07866 573 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms