RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 CCDC190Q86UF4 302 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 TMEM17Q86X19 198 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 TCTE3Q8IZS6 198 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 ZFP41Q8N8Y5 198 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 GANCQ8TET4 914 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 XAGE5Q8WWM1 108 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 ING5Q8WYH8 240 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 SLC9A6Q92581 669 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 CIDECQ96AQ7 238 aaPredicted RBP10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 OR2A14Q96R47 310 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 ZNF436Q9C0F3 470 aaPredicted RBP10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 ACOXLQ9NUZ1 547 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 LRFN2Q9ULH4 789 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 GLYATL1P3A0A0U1RQE8 302 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 DISC1C4P0D8 188 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 MAPKAPK2P49137 400 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 SNTB2Q13425 540 aaKnown RBP10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 ZNF630Q2M218 657 aaPredicted RBP10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 CDONQ4KMG0 1287 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 PM20D1Q6GTS8 502 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 KIAA1958Q8N8K9 716 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 ZNF557Q8N988 423 aaPredicted RBP10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 GATAD2BQ8WXI9 593 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 ELMOD3Q96FG2 381 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 ZC3H10Q96K80 434 aaKnown RBP10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 TSNAXQ99598 290 aaKnown RBP10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 SLX1AQ9BQ83 275 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 GPRC5BQ9NZH0 403 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 PIM2Q9P1W9 311 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 KIAA1522Q9P206 1035 aaPredicted RBP10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 SCN7AQ01118 1682 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 KRBOX1C9JBD0 128 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 ZNF670-ZNF695F2Z2N8 137 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 PRMT3O60678 531 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 WEE1P30291 646 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 RPL9P32969 192 aaKnown RBP10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 NRIP1P48552 1158 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 GINS1Q14691 196 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 FCN2Q15485 313 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 GPR68Q15743 365 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 C18orf21Q32NC0 220 aaPredicted RBP10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 PGBD2Q6P3X8 592 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 KDELC1Q6UW63 502 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 LRRN1Q6UXK5 716 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 C3P1Q6ZMU1 363 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 CBLL1Q75N03 491 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 ZNF433Q8N7K0 673 aaPredicted RBP10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 OR5AK3PQ8NH89 298 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 BBS4Q96RK4 519 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 CPPED1Q9BRF8 314 aaPredicted RBP10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 BRD9Q9H8M2 597 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 SLC28A3Q9HAS3 691 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 CTPS2Q9NRF8 586 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 MGAT4CQ9UBM8 478 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 MUTYHQ9UIF7 546 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 IGKV6D-21A0A0A0MT36 114 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 A0A1W2PPL8 197 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 GFRA2O00451 464 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 HPGDSO60760 199 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 ECDO95905 644 aaPredicted RBP10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 PDYNP01213 254 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 CDH11P55287 796 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 NAE1Q13564 534 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 VEZF1Q14119 521 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 BAK1Q16611 211 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 SLC25A25Q6KCM7 469 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 TNFAIP8L2Q6P589 184 aaPredicted RBP10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 ARL9Q6T311 187 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 LBX2Q6XYB7 198 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 RTL4Q6ZR62 310 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 DNAJB7Q7Z6W7 309 aaPredicted RBP10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 SPNS2Q8IVW8 549 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 CFAP206Q8IYR0 622 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 SYNPOQ8N3V7 929 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 CLDN19Q8N6F1 224 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 BEND7Q8N7W2 519 aaPredicted RBP10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 ACOT12Q8WYK0 555 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 ZNF419Q96HQ0 510 aaPredicted RBP10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 ARNT2Q9HBZ2 717 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 IFT46Q9NQC8 304 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 STARD7Q9NQZ5 370 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 CUEDC1Q9NWM3 386 aaPredicted RBP10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 TBC1D24Q9ULP9 559 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 IGKV6-21A0A0C4DH24 114 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 TRIM64A6NGJ6 449 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 LRRN3E7EW58 273 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 PIRO00625 290 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 TREHO43280 583 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 GMDSO60547 372 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 FCER2P06734 321 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 FNTBP49356 437 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 PCBP2Q15366 365 aaKnown RBP eCLIP10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 C1orf52Q8N6N3 182 aaKnown RBP10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 ZNF680Q8NEM1 530 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 GPRC5AQ8NFJ5 357 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 MAL2Q969L2 176 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 FERD3LQ96RJ6 166 aa10.86□□□□□ -0.67
CRNKL1-204ENST00000490910 MCMBPQ9BTE3 642 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms