RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 LRIT2A6NDA9 550 aa18.41■□□□□ 0.54
SREBF1-216ENST00000490796 SYNDIG1LA6NDD5 238 aa18.41■□□□□ 0.54
SREBF1-216ENST00000490796 C4orf51C9J302 202 aa18.41■□□□□ 0.54
SREBF1-216ENST00000490796 E7ESA3 106 aa18.41■□□□□ 0.54
SREBF1-216ENST00000490796 CLEC3AO75596 197 aa18.41■□□□□ 0.54
SREBF1-216ENST00000490796 CLDN14O95500 239 aa18.41■□□□□ 0.54
SREBF1-216ENST00000490796 S100BP04271 92 aaPredicted RBP18.41■□□□□ 0.54
SREBF1-216ENST00000490796 IFNA16P05015 189 aa18.41■□□□□ 0.54
SREBF1-216ENST00000490796 ELAVL4P26378 380 aaKnown RBP18.41■□□□□ 0.54
SREBF1-216ENST00000490796 RPL21P46778 160 aaKnown RBP18.41■□□□□ 0.54
SREBF1-216ENST00000490796 SLC6A12P48065 614 aa18.41■□□□□ 0.54
SREBF1-216ENST00000490796 MEOX1P50221 254 aa18.41■□□□□ 0.54
SREBF1-216ENST00000490796 HSF1Q00613 529 aa18.41■□□□□ 0.54
SREBF1-216ENST00000490796 RUNX2Q13950 521 aa18.41■□□□□ 0.54
SREBF1-216ENST00000490796 FAM47BQ8NA70 645 aa18.41■□□□□ 0.54
SREBF1-216ENST00000490796 AGAP11Q8TF27 550 aa18.41■□□□□ 0.54
SREBF1-216ENST00000490796 ANP32BQ92688 251 aaKnown RBP18.41■□□□□ 0.54
SREBF1-216ENST00000490796 MTFMTQ96DP5 389 aaKnown RBP18.41■□□□□ 0.54
SREBF1-216ENST00000490796 MS4A6EQ96DS6 147 aa18.41■□□□□ 0.54
SREBF1-216ENST00000490796 REXO4Q9GZR2 422 aaKnown RBP18.41■□□□□ 0.54
SREBF1-216ENST00000490796 NT5DC2Q9H857 520 aa18.41■□□□□ 0.54
SREBF1-216ENST00000490796 CD274Q9NZQ7 290 aa18.41■□□□□ 0.54
SREBF1-216ENST00000490796 ERVK-11Q9UQG0 969 aa18.41■□□□□ 0.54
SREBF1-216ENST00000490796 MTO1Q9Y2Z2 717 aaKnown RBP18.41■□□□□ 0.54
SREBF1-216ENST00000490796 APCP25054 2843 aa18.41■□□□□ 0.54
SREBF1-216ENST00000490796 USP27XA6NNY8 438 aa18.4■□□□□ 0.54
SREBF1-216ENST00000490796 ITGA10O75578 1167 aa18.4■□□□□ 0.54
SREBF1-216ENST00000490796 ZFAND5O76080 213 aa18.4■□□□□ 0.54
SREBF1-216ENST00000490796 CCDC166P0CW27 439 aa18.4■□□□□ 0.54
SREBF1-216ENST00000490796 HNRNPH1P31943 449 aaKnown RBP18.4■□□□□ 0.54
SREBF1-216ENST00000490796 ATP6V0D1P61421 351 aa18.4■□□□□ 0.54
SREBF1-216ENST00000490796 BMPR2Q13873 1038 aa18.4■□□□□ 0.54
SREBF1-216ENST00000490796 HIST2H2ACQ16777 129 aaPredicted RBP18.4■□□□□ 0.54
SREBF1-216ENST00000490796 XKR6Q5GH73 641 aa18.4■□□□□ 0.54
SREBF1-216ENST00000490796 HIST2H2AA3Q6FI13 130 aa18.4■□□□□ 0.54
SREBF1-216ENST00000490796 SULT1C3Q6IMI6 304 aa18.4■□□□□ 0.54
SREBF1-216ENST00000490796 ZNF595Q8IYB9 648 aa18.4■□□□□ 0.54
SREBF1-216ENST00000490796 SPATA6LQ8N4H0 392 aa18.4■□□□□ 0.54
SREBF1-216ENST00000490796 APCDD1LQ8NCL9 501 aa18.4■□□□□ 0.54
SREBF1-216ENST00000490796 OR2L5Q8NG80 312 aa18.4■□□□□ 0.54
SREBF1-216ENST00000490796 NCLNQ969V3 563 aa18.4■□□□□ 0.54
SREBF1-216ENST00000490796 PHF12Q96QT6 1004 aa18.4■□□□□ 0.54
SREBF1-216ENST00000490796 SERINC2Q96SA4 455 aa18.4■□□□□ 0.54
SREBF1-216ENST00000490796 AICDAQ9GZX7 198 aa18.4■□□□□ 0.54
SREBF1-216ENST00000490796 CAB39LQ9H9S4 337 aa18.4■□□□□ 0.54
SREBF1-216ENST00000490796 SAYSD1Q9NPB0 183 aa18.4■□□□□ 0.54
SREBF1-216ENST00000490796 TIMMDC1Q9NPL8 285 aa18.4■□□□□ 0.54
SREBF1-216ENST00000490796 CLCA3PQ9Y6N3 262 aa18.4■□□□□ 0.54
SREBF1-216ENST00000490796 E9PLN8 166 aa18.39■□□□□ 0.53
SREBF1-216ENST00000490796 PEX1O43933 1283 aa18.39■□□□□ 0.53
SREBF1-216ENST00000490796 CDC40O60508 579 aaKnown RBP eCLIP18.39■□□□□ 0.53
SREBF1-216ENST00000490796 STK16O75716 305 aa18.39■□□□□ 0.53
SREBF1-216ENST00000490796 PIAS1O75925 651 aa18.39■□□□□ 0.53
SREBF1-216ENST00000490796 STMN1P16949 149 aa18.39■□□□□ 0.53
SREBF1-216ENST00000490796 HSPA7P48741 367 aa18.39■□□□□ 0.53
SREBF1-216ENST00000490796 SSR4P51571 173 aa18.39■□□□□ 0.53
SREBF1-216ENST00000490796 MTTPP55157 894 aa18.39■□□□□ 0.53
SREBF1-216ENST00000490796 PAGE2BQ5JRK9 111 aa18.39■□□□□ 0.53
SREBF1-216ENST00000490796 RNFT1Q5M7Z0 435 aa18.39■□□□□ 0.53
SREBF1-216ENST00000490796 SULF2Q8IWU5 870 aa18.39■□□□□ 0.53
SREBF1-216ENST00000490796 SCUBE1Q8IWY4 988 aa18.39■□□□□ 0.53
SREBF1-216ENST00000490796 TMEM132CQ8N3T6 1108 aa18.39■□□□□ 0.53
SREBF1-216ENST00000490796 CPNE1Q99829 537 aa18.39■□□□□ 0.53
SREBF1-216ENST00000490796 VKORC1Q9BQB6 163 aa18.39■□□□□ 0.53
SREBF1-216ENST00000490796 EFCAB11Q9BUY7 163 aa18.39■□□□□ 0.53
SREBF1-216ENST00000490796 DPH5Q9H2P9 285 aa18.39■□□□□ 0.53
SREBF1-216ENST00000490796 EHD1Q9H4M9 534 aa18.39■□□□□ 0.53
SREBF1-216ENST00000490796 ADAP2Q9NPF8 381 aa18.39■□□□□ 0.53
SREBF1-216ENST00000490796 COQ3Q9NZJ6 369 aa18.39■□□□□ 0.53
SREBF1-216ENST00000490796 PPT2Q9UMR5 302 aa18.39■□□□□ 0.53
SREBF1-216ENST00000490796 YARS2Q9Y2Z4 477 aaKnown RBP18.39■□□□□ 0.53
SREBF1-216ENST00000490796 A8MVJ9 347 aa18.38■□□□□ 0.53
SREBF1-216ENST00000490796 PHGDHO43175 533 aaKnown RBP18.38■□□□□ 0.53
SREBF1-216ENST00000490796 ZNHIT1O43257 154 aa18.38■□□□□ 0.53
SREBF1-216ENST00000490796 SSTR1P30872 391 aa18.38■□□□□ 0.53
SREBF1-216ENST00000490796 PTGS2P35354 604 aa18.38■□□□□ 0.53
SREBF1-216ENST00000490796 RFC3P40938 356 aa18.38■□□□□ 0.53
SREBF1-216ENST00000490796 STX4Q12846 297 aa18.38■□□□□ 0.53
SREBF1-216ENST00000490796 LAPTM5Q13571 262 aa18.38■□□□□ 0.53
SREBF1-216ENST00000490796 EFTUD2Q15029 972 aaKnown RBP eCLIP18.38■□□□□ 0.536e-8■■■■□ 21.4
SREBF1-216ENST00000490796 PDK4Q16654 411 aa18.38■□□□□ 0.53
SREBF1-216ENST00000490796 FBXO48Q5FWF7 155 aa18.38■□□□□ 0.53
SREBF1-216ENST00000490796 CDKL4Q5MAI5 379 aa18.38■□□□□ 0.53
SREBF1-216ENST00000490796 C3P1Q6ZMU1 363 aa18.38■□□□□ 0.53
SREBF1-216ENST00000490796 MAATS1Q7Z4T9 603 aa18.38■□□□□ 0.53
SREBF1-216ENST00000490796 CLNKQ7Z7G1 428 aa18.38■□□□□ 0.53
SREBF1-216ENST00000490796 ZNF227Q86WZ6 799 aa18.38■□□□□ 0.53
SREBF1-216ENST00000490796 DOLPP1Q86YN1 238 aa18.38■□□□□ 0.53
SREBF1-216ENST00000490796 ARMC10Q8N2F6 343 aa18.38■□□□□ 0.53
SREBF1-216ENST00000490796 DAZLQ92904 295 aaKnown RBP18.38■□□□□ 0.53
SREBF1-216ENST00000490796 EXT2Q93063 718 aa18.38■□□□□ 0.53
SREBF1-216ENST00000490796 PTCD3Q96EY7 689 aaKnown RBP18.38■□□□□ 0.53
SREBF1-216ENST00000490796 ROGDIQ9GZN7 287 aa18.38■□□□□ 0.53
SREBF1-216ENST00000490796 SMYD2Q9NRG4 433 aa18.38■□□□□ 0.53
SREBF1-216ENST00000490796 HPF1Q9NWY4 346 aa18.38■□□□□ 0.53
SREBF1-216ENST00000490796 RNF112Q9ULX5 631 aa18.38■□□□□ 0.53
SREBF1-216ENST00000490796 SPACA6W5XKT8 324 aa18.38■□□□□ 0.53
SREBF1-216ENST00000490796 CSMD1Q96PZ7 3565 aa18.38■□□□□ 0.53
SREBF1-216ENST00000490796 EIF3HO15372 352 aaKnown RBP eCLIP18.37■□□□□ 0.53
SREBF1-216ENST00000490796 TAPBPO15533 448 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms