RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 NAE1Q13564 534 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 HYAL4Q2M3T9 481 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 RIPPLY2Q5TAB7 128 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 PAMR1Q6UXH9 720 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 GK5Q6ZS86 529 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 TRILQ7L0X0 811 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 SLC22A16Q86VW1 577 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 CDC20BQ86Y33 519 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 LIX1LQ8IVB5 337 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 DENND6AQ8IWF6 608 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 SCUBE1Q8IWY4 988 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 TBC1D19Q8N5T2 526 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 ARMC2Q8NEN0 867 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 OR10Q1Q8NGQ4 319 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 OR56A3Q8NH54 315 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 UTP15Q8TED0 518 aaKnown RBP7.61□□□□□ -1.19
USP39-216ENST00000490193 SMC6Q96SB8 1091 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 AARSD1Q9BTE6 412 aaKnown RBP7.61□□□□□ -1.19
USP39-216ENST00000490193 TTTY12Q9BZ98 90 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 ATG10Q9H0Y0 220 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 PARVBQ9HBI1 364 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 FBXO6Q9NRD1 293 aaPredicted RBP7.61□□□□□ -1.19
USP39-216ENST00000490193 KCMF1Q9P0J7 381 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 B4GALT7Q9UBV7 327 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 ADAMTS6Q9UKP5 1117 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 FBXW2Q9UKT8 454 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 PLEKHA6Q9Y2H5 1048 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 PCDHGB3Q9Y5G1 929 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 CLDN16Q9Y5I7 305 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 CAPN6Q9Y6Q1 641 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 ZCWPW2A0A1B0GU75 182 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 TCRBV7S3A2A0A539 114 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 MAGEB16A2A368 324 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 URADA6NGE7 173 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 A6NNC1 897 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 FAM166BA8MTA8 275 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 A8MVJ9 347 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 PSMD12O00232 456 aaPredicted RBP7.6□□□□□ -1.19
USP39-216ENST00000490193 SYT5O00445 386 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 PRKNO60260 465 aaPredicted RBP7.6□□□□□ -1.19
USP39-216ENST00000490193 ZFAND5O76080 213 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 MYO1DO94832 1006 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 MLNP12872 115 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 SLC1A2P43004 574 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 KIR2DL3P43628 341 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 RGS4P49798 205 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 HSD17B7P56937 341 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 TIAL1Q01085 375 aaKnown RBP eCLIP7.6□□□□□ -1.19
USP39-216ENST00000490193 PLGLB1Q02325 96 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 DHX9Q08211 1270 aaKnown RBP7.6□□□□□ -1.19
USP39-216ENST00000490193 HYAL2Q12891 473 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 DHX34Q14147 1143 aaKnown RBP7.6□□□□□ -1.19
USP39-216ENST00000490193 DAZAP2Q15038 168 aaPredicted RBP7.6□□□□□ -1.19
USP39-216ENST00000490193 FBXL19-AS1Q494R0 122 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 FLYWCH1Q4VC44 716 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 C1orf185Q5T7R7 199 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 DUPD1Q68J44 220 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 ZNF585AQ6P3V2 769 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 MBOAT1Q6ZNC8 495 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 KIAA1328Q86T90 577 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 CA13Q8N1Q1 262 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 TXLNBQ8N3L3 684 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 FAM109AQ8N4B1 249 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 TMEM251Q8N6I4 163 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 GOLM1Q8NBJ4 401 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 TRPV3Q8NET8 790 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 OR5M9Q8NGP3 310 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 FAM222BQ8WU58 562 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 EEF1AKMT1Q8WVE0 214 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 SNF8Q96H20 258 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 PDLIM2Q96JY6 352 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 C18orf12Q96KH6 178 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 OR4K3Q96R72 315 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 FAM173AQ9BQD7 235 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 CCDC77Q9BR77 488 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 TRIM5Q9C035 493 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 SPNS1Q9H2V7 528 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 TSPY26PQ9H489 355 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 IL1RL2Q9HB29 575 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 HPF1Q9NWY4 346 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 CRIM1Q9NZV1 1036 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 MYOTQ9UBF9 498 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 ERVK-11Q9UQG0 969 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 ZKSCAN5Q9Y2L8 839 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 LIPGQ9Y5X9 500 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 NCKAP5O14513 1909 aa7.6□□□□□ -1.19
USP39-216ENST00000490193 FN1P02751 2386 aaKnown RBP7.6□□□□□ -1.19
USP39-216ENST00000490193 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.59□□□□□ -1.19
USP39-216ENST00000490193 A0A0G2JMM0 328 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 A0A1W2PPB8 328 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 A0A1W2PRS3 328 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 A8MUA0 341 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 KIR3DP1A8MWS1 328 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 C4orf51C9J302 202 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 TGFBR3LH3BV60 316 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 HCN1O60741 890 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 AVILO75366 819 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 OR2J2O76002 312 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 OR6B1O95007 311 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 GOSR1O95249 250 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms