RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 CCDC152Q4G0S7 254 aa5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 SPATA46Q5T0L3 261 aa5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 SNRNP48Q6IEG0 339 aaKnown RBP5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 OR4C11Q6IEV9 310 aa5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 YRDCQ86U90 279 aaKnown RBP5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 ZDHHC21Q8IVQ6 265 aa5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 ZCCHC7Q8N3Z6 543 aaKnown RBP5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 ZNF441Q8N8Z8 693 aa5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 STKLD1Q8NE28 680 aa5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 RNF139Q8WU17 664 aa5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 CHPT1Q8WUD6 406 aa5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 TUBGCP3Q96CW5 907 aa5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 BPIFA2Q96DR5 249 aa5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 SLC47A1Q96FL8 570 aa5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 NSL1Q96IY1 281 aa5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 RPGRIP1Q96KN7 1286 aa5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 C4orf45Q96LM5 186 aa5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 ZNF385AQ96PM9 386 aaKnown RBP5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 EDEM2Q9BV94 578 aa5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 FUNDC2Q9BWH2 189 aa5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 NUSAP1Q9BXS6 441 aaKnown RBP5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 SHARPINQ9H0F6 387 aa5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 IL36AQ9UHA7 158 aa5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 POU2F3Q9UKI9 436 aa5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.86□□□□□ -1.47
TM9SF3-206ENST00000490192 ATP6AP2A0A1C7CYW4 349 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 SRRM3A6NNA2 597 aaPredicted RBP5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 LGALS8O00214 317 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 MLNRO43193 412 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 ZNF821O75541 412 aaPredicted RBP5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 MT-ND2P03891 347 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 ATP1B1P05026 303 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 CA3P07451 260 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 PRSS2P07478 247 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 ASNSP08243 561 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 HOXC6P09630 235 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 CT45A8P0DMV1 189 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 CT45A9P0DMV2 189 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 EFNA1P20827 205 aaPredicted RBP5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 PPP2R1AP30153 589 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 FCGR2BP31994 310 aaPredicted RBP5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 PTGER3P43115 390 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 C21orf58P58505 322 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 UBE2HP62256 183 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 ITGA9Q13797 1035 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 CEACAM7Q14002 265 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 SQLEQ14534 574 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 HEPACAMQ14CZ8 416 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 EZH2Q15910 746 aaKnown RBP5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 CT45A2Q5DJT8 189 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 ARHGEF16Q5VV41 709 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 LYPLAL1Q5VWZ2 237 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 LIPKQ5VXJ0 399 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 NCR3LG1Q68D85 454 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 ZNF776Q68DI1 518 aaPredicted RBP5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 HIST2H2AA3Q6FI13 130 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 SLC27A4Q6P1M0 643 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 CEACAM20Q6UY09 585 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 TRMT1LQ7Z2T5 733 aaKnown RBP5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 NRACQ8N912 160 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 GANCQ8TET4 914 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 CTNNBL1Q8WYA6 563 aaPredicted RBP5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 NCLNQ969V3 563 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 EXOC1Q9NV70 894 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 RNF186Q9NXI6 227 aa5.85□□□□□ -1.47
TM9SF3-206ENST00000490192 RAD54L2Q9Y4B4 1467 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 EME2A4GXA9 379 aaPredicted RBP5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 TULP2O00295 520 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 TBX19O60806 448 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 MSH3P20585 1137 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 ATP6V1C1P21283 382 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 PTPN4P29074 926 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 OTX2P32243 289 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 SLC1A3P43003 542 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 SLC6A8P48029 635 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 NR2C2P49116 596 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 MRPL28Q13084 256 aaKnown RBP5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 ZBTB17Q13105 803 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 GPR50Q13585 617 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 PDK4Q16654 411 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 SIRPB2Q5JXA9 342 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 CYP4V2Q6ZWL3 525 aaPredicted RBP5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 ZNF679Q8IYX0 411 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 TRIM58Q8NG06 486 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 OR7A2PQ8NGA2 310 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 OR13C3Q8NGS6 347 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 OR2T3Q8NH03 318 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 MCHR2Q969V1 340 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 TMEM45BQ96B21 275 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 NXPE2Q96DL1 559 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 AGPAT1Q99943 283 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 IL25Q9H293 177 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 ZNF665Q9H7R5 613 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 WDR76Q9H967 626 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 VPS37BQ9H9H4 285 aa5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 MRTO4Q9UKD2 239 aaKnown RBP5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 MRPS7Q9Y2R9 242 aaKnown RBP5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 DDX49Q9Y6V7 483 aaKnown RBP5.84□□□□□ -1.47
TM9SF3-206ENST00000490192 C15orf38-AP3S2A0A0A6YYH1 394 aa5.83□□□□□ -1.48
TM9SF3-206ENST00000490192 MTMR11A4FU01 709 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms