RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 TCF7L2Q9NQB0 619 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 HIF1ANQ9NWT6 349 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ERRFI1Q9UJM3 462 aaPredicted RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 NOCTQ9UK39 431 aaKnown RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ZNF510Q9Y2H8 683 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 MRPS2Q9Y399 296 aaKnown RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 TOPAZ1Q8N9V7 1692 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 QRICH2Q9H0J4 1663 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 JCADQ9P266 1359 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 C15orf38-AP3S2A0A0A6YYH1 394 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 A0A1W2PN81 502 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 TMEM129A0AVI4 362 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 IFITM10A6NMD0 228 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 ANKRD66B4E2M5 251 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 SDHDO14521 159 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 HSPB6O14558 160 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 KLF11O14901 512 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 PSMD3O43242 534 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 GRID2O43424 1007 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 KIF1CO43896 1103 aaKnown RBP2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 B4GALT2O60909 372 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 IGHV2-70P01814 119 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 UGT2B4P06133 528 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 PROS1P07225 676 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 ASNSP08243 561 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 HOXC6P09630 235 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 CEACAM1P13688 526 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 CSF2RAP15509 400 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 PTBP1P26599 531 aaKnown RBP eCLIP2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 MARCKSP29966 332 aaPredicted RBP2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 CHRNA5P30532 468 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 PRDX2P32119 198 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 DUTP33316 252 aaKnown RBP2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 PTGER4P35408 488 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 CHRNA7P36544 502 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 CDX1P47902 265 aaPredicted RBP2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 PCYT1AP49585 367 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 ENTPD1P49961 510 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 CLDN15P56746 228 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 NLRP11P59045 1033 aaKnown RBP2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 FKBP1BP68106 108 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 SRSF5Q13243 272 aaKnown RBP2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 VEZF1Q14119 521 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 KEAP1Q14145 624 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 DOC2AQ14183 400 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 GPR18Q14330 331 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 STXBP2Q15833 593 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 DPYSL2Q16555 572 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 ANKRD55Q3KP44 614 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 ALG10Q5BKT4 473 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 ALG10BQ5I7T1 473 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 PRAMEF20Q5VT98 475 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 SIGIRRQ6IA17 410 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 RGMBQ6NW40 437 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 ANKRD33Q7Z3H0 272 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 RBM23Q86U06 439 aaKnown RBP2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 SERPINA11Q86U17 422 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 CENPLQ8N0S6 344 aaPredicted RBP2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 HORMAD2Q8N7B1 307 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 ZNF611Q8N823 705 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 LEMD2Q8NC56 503 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 STKLD1Q8NE28 680 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 FAM71CQ8NEG0 241 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 ENGASEQ8NFI3 743 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 PHF21BQ96EK2 531 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 FAM81BQ96LP2 452 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 HARBI1Q96MB7 349 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 USP28Q96RU2 1077 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 SSX3Q99909 188 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 MSTO1Q9BUK6 570 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 POLDIP3Q9BY77 421 aaKnown RBP2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 MEAF6Q9HAF1 191 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 RAB18Q9NP72 206 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 KRCC1Q9NPI7 259 aaPredicted RBP2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 TBC1D13Q9NVG8 400 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 ANKRD10Q9NXR5 420 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 ATXN10Q9UBB4 475 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 ONECUT1Q9UBC0 465 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 TINAGQ9UJW2 476 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 GRID1Q9ULK0 1009 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 MGAT4BQ9UQ53 548 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 TMED3Q9Y3Q3 217 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 MARF1Q9Y4F3 1742 aaKnown RBP2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 BCL9LQ86UU0 1499 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 PPIP5K1Q6PFW1 1433 aa2.96□□□□□ -1.94
DEPDC1-204ENST00000489862 SBNO1A3KN83 1393 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 MROH5Q6ZUA9 1318 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 EVC2Q86UK5 1308 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 ALS2Q96Q42 1657 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 KANSL1LA0AUZ9 987 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 MAGEB16A2A368 324 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 GAGE12JA6NER3 117 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 NEMP2A6NFY4 417 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 SLC15A5A6NIM6 579 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 OR6C75A6NL08 312 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 NTN3O00634 580 aaPredicted RBP2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 ACOT8O14734 319 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 RNMTO43148 476 aaKnown RBP2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 RGS14O43566 566 aa2.95□□□□□ -1.94
DEPDC1-204ENST00000489862 SSX5O60225 188 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms