RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 CREBRFQ8IUR6 639 aa2.8□□□□□ -1.96
RFC4-213ENST00000489028 SETD6Q8TBK2 473 aa2.8□□□□□ -1.96
RFC4-213ENST00000489028 GRK7Q8WTQ7 553 aa2.8□□□□□ -1.96
RFC4-213ENST00000489028 RIT1Q92963 219 aa2.8□□□□□ -1.96
RFC4-213ENST00000489028 FAM162AQ96A26 154 aa2.8□□□□□ -1.96
RFC4-213ENST00000489028 TSSK2Q96PF2 358 aa2.8□□□□□ -1.96
RFC4-213ENST00000489028 INTS14Q96SY0 518 aa2.8□□□□□ -1.96
RFC4-213ENST00000489028 CITED2Q99967 270 aaPredicted RBP2.8□□□□□ -1.96
RFC4-213ENST00000489028 INPP5KQ9BT40 448 aa2.8□□□□□ -1.96
RFC4-213ENST00000489028 DPEP2Q9H4A9 486 aa2.8□□□□□ -1.96
RFC4-213ENST00000489028 ZNF346Q9UL40 294 aaKnown RBP2.8□□□□□ -1.96
RFC4-213ENST00000489028 NCKAP1Q9Y2A7 1128 aa2.8□□□□□ -1.96
RFC4-213ENST00000489028 SALL1Q9NSC2 1324 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 TRBV5-4A0A0C4DH59 114 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 H0Y626 953 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 INPP4BO15327 924 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 TXNL1O43396 289 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 ACSL4O60488 711 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 SEMA4FO95754 770 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 MOCS2O96007 188 aaPredicted RBP2.79□□□□□ -1.96
RFC4-213ENST00000489028 ATP5DP30049 168 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 SRD5A2P31213 254 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 GP5P40197 560 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 CRYBA2P53672 197 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 BACE1P56817 501 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 ACY1Q03154 408 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 GCKRQ14397 625 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 MAPK11Q15759 364 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.79□□□□□ -1.96
RFC4-213ENST00000489028 AGAP7PQ5VUJ5 663 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 TCEAL6Q6IPX3 200 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 C17orf107Q6ZR85 190 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 Q71RC1 249 aaPredicted RBP2.79□□□□□ -1.96
RFC4-213ENST00000489028 IQCA1Q86XH1 822 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 GOT1L1Q8NHS2 421 aaPredicted RBP2.79□□□□□ -1.96
RFC4-213ENST00000489028 AFAP1L1Q8TED9 768 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 EXOC4Q96A65 974 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 PSMB7Q99436 277 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 HNRNPABQ99729 332 aaKnown RBP2.79□□□□□ -1.96
RFC4-213ENST00000489028 MOB1AQ9H8S9 216 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 WDR41Q9HAD4 459 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 TMOD3Q9NYL9 352 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 ZNF581Q9P0T4 197 aa2.79□□□□□ -1.96
RFC4-213ENST00000489028 DBF4Q9UBU7 674 aaPredicted RBP2.79□□□□□ -1.96
RFC4-213ENST00000489028 A0A0B4J203 849 aa2.78□□□□□ -1.96
RFC4-213ENST00000489028 SRRM4A7MD48 611 aaKnown RBP2.78□□□□□ -1.96
RFC4-213ENST00000489028 SELENOFO60613 162 aa2.78□□□□□ -1.96
RFC4-213ENST00000489028 SLU7O95391 586 aaKnown RBP2.78□□□□□ -1.96
RFC4-213ENST00000489028 ZFYP08048 801 aaPredicted RBP2.78□□□□□ -1.96
RFC4-213ENST00000489028 OAS2P29728 719 aaKnown RBP2.78□□□□□ -1.96
RFC4-213ENST00000489028 FCGR2BP31994 310 aaPredicted RBP2.78□□□□□ -1.96
RFC4-213ENST00000489028 FCGR2CP31995 323 aa2.78□□□□□ -1.96
RFC4-213ENST00000489028 OR3A3P47888 321 aa2.78□□□□□ -1.96
RFC4-213ENST00000489028 SCN1BQ07699 218 aa2.78□□□□□ -1.96
RFC4-213ENST00000489028 CNTN1Q12860 1018 aa2.78□□□□□ -1.96
RFC4-213ENST00000489028 PPA1Q15181 289 aa2.78□□□□□ -1.96
RFC4-213ENST00000489028 C3AR1Q16581 482 aa2.78□□□□□ -1.96
RFC4-213ENST00000489028 CDO1Q16878 200 aa2.78□□□□□ -1.96
RFC4-213ENST00000489028 POM121L1PQ3SYA9 428 aa2.78□□□□□ -1.96
RFC4-213ENST00000489028 ODF2Q5BJF6 829 aa2.78□□□□□ -1.96
RFC4-213ENST00000489028 DCLRE1AQ6PJP8 1040 aa2.78□□□□□ -1.96
RFC4-213ENST00000489028 SPATA19Q7Z5L4 167 aa2.78□□□□□ -1.96
RFC4-213ENST00000489028 SNX32Q86XE0 403 aa2.78□□□□□ -1.96
RFC4-213ENST00000489028 MEX3DQ86XN8 651 aaKnown RBP2.78□□□□□ -1.96
RFC4-213ENST00000489028 KLHL30-AS1Q8NEE0 82 aa2.78□□□□□ -1.96
RFC4-213ENST00000489028 SMPDL3AQ92484 453 aa2.78□□□□□ -1.96
RFC4-213ENST00000489028 FERMT1Q9BQL6 677 aa2.78□□□□□ -1.96
RFC4-213ENST00000489028 THUMPD3Q9BV44 507 aaKnown RBP2.78□□□□□ -1.96
RFC4-213ENST00000489028 LRRCC1Q9C099 1032 aa2.78□□□□□ -1.96
RFC4-213ENST00000489028 STRADBQ9C0K7 418 aa2.78□□□□□ -1.96
RFC4-213ENST00000489028 KCNK13Q9HB14 408 aa2.78□□□□□ -1.96
RFC4-213ENST00000489028 HBS1LQ9Y450 684 aaKnown RBP2.78□□□□□ -1.96
RFC4-213ENST00000489028 PCDHGA1Q9Y5H4 931 aa2.78□□□□□ -1.96
RFC4-213ENST00000489028 ZFP37Q9Y6Q3 630 aaPredicted RBP2.78□□□□□ -1.96
RFC4-213ENST00000489028 ATRXP46100 2492 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 RALGAPA1Q6GYQ0 2036 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 ARHGEF37A1IGU5 675 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 HTR3EA5X5Y0 456 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 SERINC4A6NH21 518 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 STX6O43752 255 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 BAG2O95816 211 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 HCKP08631 526 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 DUX4L4P0CJ87 422 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 PTMSP20962 102 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 CAPZA1P52907 286 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 CYLC2Q14093 348 aaPredicted RBP2.77□□□□□ -1.97
RFC4-213ENST00000489028 CDC37Q16543 378 aaPredicted RBP2.77□□□□□ -1.97
RFC4-213ENST00000489028 CCL14Q16627 93 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 TMEM44Q2T9K0 475 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 RNLSQ5VYX0 342 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 NEPROQ6NW34 567 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 SLC27A4Q6P1M0 643 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 SHQ1Q6PI26 577 aaKnown RBP2.77□□□□□ -1.97
RFC4-213ENST00000489028 VITQ6UXI7 678 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 SPATA21Q7Z572 469 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 CCDC91Q7Z6B0 441 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 TIGD4Q8IY51 512 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 SLC43A2Q8N370 569 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 TMCO5AQ8N6Q1 288 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 MSANTD4Q8NCY6 345 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms