RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 MED20Q9H944 212 aa3.28□□□□□ -1.88
HFM1-208ENST00000488023 A4GALTQ9NPC4 353 aa3.28□□□□□ -1.88
HFM1-208ENST00000488023 HPS4Q9NQG7 708 aa3.28□□□□□ -1.88
HFM1-208ENST00000488023 FAM114A2Q9NRY5 505 aa3.28□□□□□ -1.88
HFM1-208ENST00000488023 TBC1D13Q9NVG8 400 aa3.28□□□□□ -1.88
HFM1-208ENST00000488023 CFAP45Q9UL16 551 aa3.28□□□□□ -1.88
HFM1-208ENST00000488023 NCKAP1Q9Y2A7 1128 aa3.28□□□□□ -1.88
HFM1-208ENST00000488023 RAD54L2Q9Y4B4 1467 aa3.28□□□□□ -1.88
HFM1-208ENST00000488023 ZMYM6O95789 1325 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 PHLPP2Q6ZVD8 1323 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 E9PI62 339 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 L7N2F9 121 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 KLF11O14901 512 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 ZNF208O43345 1280 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 SYT7O43581 403 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 BUB1O43683 1085 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 GOT2P00505 430 aaKnown RBP3.27□□□□□ -1.89
HFM1-208ENST00000488023 CALCAP01258 141 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 RAF1P04049 648 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 MYOD1P15172 320 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 NAGAP17050 411 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 CDH3P22223 829 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 UQCRC2P22695 453 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 CHI3L1P36222 383 aaPredicted RBP3.27□□□□□ -1.89
HFM1-208ENST00000488023 GLIPR1P48060 266 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 THOP1P52888 689 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 RPS13P62277 151 aaKnown RBP3.27□□□□□ -1.89
HFM1-208ENST00000488023 CBX1P83916 185 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 TAF10Q12962 218 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 SELPLGQ14242 412 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 GPR18Q14330 331 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 INPP5JQ15735 1006 aaPredicted RBP3.27□□□□□ -1.89
HFM1-208ENST00000488023 HADHQ16836 314 aaKnown RBP3.27□□□□□ -1.89
HFM1-208ENST00000488023 ODF3L2Q3SX64 289 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 WASHC2DQ5SRD0 308 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 NDUFAF5Q5TEU4 345 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 PRAMEF20Q5VT98 475 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 LIPJQ5W064 366 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 PAQR9Q6ZVX9 377 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 TRMT1LQ7Z2T5 733 aaKnown RBP3.27□□□□□ -1.89
HFM1-208ENST00000488023 CPEB2Q7Z5Q1 589 aaKnown RBP3.27□□□□□ -1.89
HFM1-208ENST00000488023 FAM228AQ86W67 206 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 PSTKQ8IV42 348 aaKnown RBP3.27□□□□□ -1.89
HFM1-208ENST00000488023 CNGA4Q8IV77 575 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 ZC3H3Q8IXZ2 948 aaKnown RBP3.27□□□□□ -1.89
HFM1-208ENST00000488023 CDK20Q8IZL9 346 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 DCLK2Q8N568 766 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 NIPA2Q8N8Q9 360 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 BBOF1Q8ND07 529 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 PNPT1Q8TCS8 783 aaKnown RBP3.27□□□□□ -1.89
HFM1-208ENST00000488023 ATP8B4Q8TF62 1192 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 TMEM19Q96HH6 336 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 RBM14Q96PK6 669 aaKnown RBP3.27□□□□□ -1.89
HFM1-208ENST00000488023 PLIN2Q99541 437 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 ZMYND12Q9H0C1 365 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 MEAF6Q9HAF1 191 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 PELI2Q9HAT8 420 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 KCNK13Q9HB14 408 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 ZNF701Q9NV72 531 aaPredicted RBP3.27□□□□□ -1.89
HFM1-208ENST00000488023 GDAP2Q9NXN4 497 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 BARHL2Q9NY43 387 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 MIS18AQ9NYP9 233 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 P2RX2Q9UBL9 471 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 B9D1Q9UPM9 204 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 MRPS2Q9Y399 296 aaKnown RBP3.27□□□□□ -1.89
HFM1-208ENST00000488023 CHTOPQ9Y3Y2 248 aaKnown RBP3.27□□□□□ -1.89
HFM1-208ENST00000488023 PARD3Q8TEW0 1356 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 ARHGEF35A5YM69 484 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 GOLGA6L9A6NEM1 432 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 C4orf47A7E2U8 309 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 BECN2A8MW95 431 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 E5RJQ4 531 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 EXTL3O43909 919 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 KIF5CO60282 957 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 DNAJB6O75190 326 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 PRKRAO75569 313 aaKnown RBP3.27□□□□□ -1.89
HFM1-208ENST00000488023 GRAP2O75791 330 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 NEBLO76041 1014 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 NTN1O95631 604 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 IFNA2P01563 188 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 CD59P13987 128 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 CSF2RAP15509 400 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 HTR2AP28223 471 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 STIP1P31948 543 aaKnown RBP3.27□□□□□ -1.89
HFM1-208ENST00000488023 CCKBRP32239 447 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 SFTPDP35247 375 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 SLC6A8P48029 635 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 PDX1P52945 283 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 FOXG1P55316 489 aaPredicted RBP3.27□□□□□ -1.89
HFM1-208ENST00000488023 BRWD1-AS2P59051 145 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 SRSF5Q13243 272 aaKnown RBP3.27□□□□□ -1.89
HFM1-208ENST00000488023 PDK3Q15120 406 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 SPHARQ15513 63 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 CAMK4Q16566 473 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 PHKG1Q16816 387 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 ODF4Q2M2E3 257 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 ZNF528Q3MIS6 628 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 BCL7AQ4VC05 210 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 ATF7IP2Q5U623 682 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms