RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 DPEP2Q9H4A9 486 aa2.72□□□□□ -1.97
CCDC66-221ENST00000487739 PLEKHA3Q9HB20 300 aa2.72□□□□□ -1.97
CCDC66-221ENST00000487739 SSTR1P30872 391 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 HSPA4P34932 840 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 BRCC3P46736 316 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 SLC1A6P48664 564 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 RGS7P49802 495 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 MFAP3P55082 362 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 RBBP4Q09028 425 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 PPA1Q15181 289 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 PCK2Q16822 640 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.71□□□□□ -1.98
CCDC66-221ENST00000487739 REP15Q6BDI9 236 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 ZNF600Q6ZNG1 722 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 NUFIP2Q7Z417 695 aaKnown RBP2.71□□□□□ -1.98
CCDC66-221ENST00000487739 NAXDQ8IW45 347 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 ZNF525Q8N782 197 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 CAMKVQ8NCB2 501 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 BEST4Q8NFU0 473 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 OR6F1Q8NGZ6 308 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 ZNF285Q96NJ3 590 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 SIGLEC12Q96PQ1 595 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 HSD17B14Q9BPX1 270 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 NACAP1Q9BZK3 213 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 LIME1Q9H400 295 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 C10orf88Q9H8K7 445 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 NMUR1Q9HB89 426 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 TERF2IPQ9NYB0 399 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 SWAP70Q9UH65 585 aa2.71□□□□□ -1.98
CCDC66-221ENST00000487739 NIP7Q9Y221 180 aaKnown RBP eCLIP2.71□□□□□ -1.98
CCDC66-221ENST00000487739 ZSCAN5CA6NGD5 496 aaPredicted RBP2.7□□□□□ -1.98
CCDC66-221ENST00000487739 NPIPA3F8WFD2 350 aa2.7□□□□□ -1.98
CCDC66-221ENST00000487739 PGRMC2O15173 223 aa2.7□□□□□ -1.98
CCDC66-221ENST00000487739 MLNRO43193 412 aa2.7□□□□□ -1.98
CCDC66-221ENST00000487739 RHBDL1O75783 438 aa2.7□□□□□ -1.98
CCDC66-221ENST00000487739 ADRB2P07550 413 aa2.7□□□□□ -1.98
CCDC66-221ENST00000487739 FASP25445 335 aa2.7□□□□□ -1.98
CCDC66-221ENST00000487739 ADARP55265 1226 aaKnown RBP2.7□□□□□ -1.98
CCDC66-221ENST00000487739 CNTN1Q12860 1018 aa2.7□□□□□ -1.98
CCDC66-221ENST00000487739 MAPK11Q15759 364 aa2.7□□□□□ -1.98
CCDC66-221ENST00000487739 RFTN2Q52LD8 501 aaPredicted RBP2.7□□□□□ -1.98
CCDC66-221ENST00000487739 MFSD4BQ5TF39 518 aa2.7□□□□□ -1.98
CCDC66-221ENST00000487739 CST9LP1Q5W188 147 aa2.7□□□□□ -1.98
CCDC66-221ENST00000487739 RFWD3Q6PCD5 774 aa2.7□□□□□ -1.98
CCDC66-221ENST00000487739 PP632Q6XCG6 107 aa2.7□□□□□ -1.98
CCDC66-221ENST00000487739 PRPF39Q86UA1 669 aaKnown RBP2.7□□□□□ -1.98
CCDC66-221ENST00000487739 TBC1D10CQ8IV04 446 aa2.7□□□□□ -1.98
CCDC66-221ENST00000487739 CROCCP3Q8IVE0 287 aa2.7□□□□□ -1.98
CCDC66-221ENST00000487739 PI4KAP1Q8N8J0 262 aa2.7□□□□□ -1.98
CCDC66-221ENST00000487739 PCNPQ8WW12 178 aaKnown RBP2.7□□□□□ -1.98
CCDC66-221ENST00000487739 MCCC1Q96RQ3 725 aaPredicted RBP2.7□□□□□ -1.98
CCDC66-221ENST00000487739 MAPKAP1Q9BPZ7 522 aa2.7□□□□□ -1.98
CCDC66-221ENST00000487739 SLF1Q9BQI6 1058 aa2.7□□□□□ -1.98
CCDC66-221ENST00000487739 VNN3Q9NY84 501 aa2.7□□□□□ -1.98
CCDC66-221ENST00000487739 ITGA11Q9UKX5 1188 aa2.7□□□□□ -1.98
CCDC66-221ENST00000487739 CLEC4EQ9ULY5 219 aa2.7□□□□□ -1.98
CCDC66-221ENST00000487739 RUVBL2Q9Y230 463 aaKnown RBP2.7□□□□□ -1.98
CCDC66-221ENST00000487739 NCKAP1Q9Y2A7 1128 aa2.7□□□□□ -1.98
CCDC66-221ENST00000487739 PLEKHA6Q9Y2H5 1048 aa2.7□□□□□ -1.98
CCDC66-221ENST00000487739 HEG1Q9ULI3 1381 aa2.7□□□□□ -1.98
CCDC66-221ENST00000487739 E2F3O00716 465 aa2.69□□□□□ -1.98
CCDC66-221ENST00000487739 TNFSF11O14788 317 aa2.69□□□□□ -1.98
CCDC66-221ENST00000487739 FIBPO43427 364 aa2.69□□□□□ -1.98
CCDC66-221ENST00000487739 SCO2O43819 266 aa2.69□□□□□ -1.98
CCDC66-221ENST00000487739 PRAF2O60831 178 aa2.69□□□□□ -1.98
CCDC66-221ENST00000487739 FRAT2O75474 233 aaPredicted RBP2.69□□□□□ -1.98
CCDC66-221ENST00000487739 MYBL1P10243 752 aa2.69□□□□□ -1.98
CCDC66-221ENST00000487739 EEF2P13639 858 aaKnown RBP2.69□□□□□ -1.98
CCDC66-221ENST00000487739 CPT2P23786 658 aa2.69□□□□□ -1.98
CCDC66-221ENST00000487739 MEOX2P50222 304 aa2.69□□□□□ -1.98
CCDC66-221ENST00000487739 HMGCS2P54868 508 aa2.69□□□□□ -1.98
CCDC66-221ENST00000487739 RPS27AP62979 156 aaKnown RBP2.69□□□□□ -1.98
CCDC66-221ENST00000487739 CRMP1Q14194 572 aa2.69□□□□□ -1.98
CCDC66-221ENST00000487739 LRRC73Q5JTD7 316 aa2.69□□□□□ -1.98
CCDC66-221ENST00000487739 LIPJQ5W064 366 aa2.69□□□□□ -1.98
CCDC66-221ENST00000487739 CGB2Q6NT52 195 aa2.69□□□□□ -1.98
CCDC66-221ENST00000487739 ADGRD2Q7Z7M1 963 aa2.69□□□□□ -1.98
CCDC66-221ENST00000487739 LIPHQ8WWY8 451 aa2.69□□□□□ -1.98
CCDC66-221ENST00000487739 RMDN2Q96LZ7 410 aa2.69□□□□□ -1.98
CCDC66-221ENST00000487739 ZBP1Q9H171 429 aa2.69□□□□□ -1.98
CCDC66-221ENST00000487739 SH3GLB2Q9NR46 395 aa2.69□□□□□ -1.98
CCDC66-221ENST00000487739 MRGBPQ9NV56 204 aa2.69□□□□□ -1.98
CCDC66-221ENST00000487739 HBS1LQ9Y450 684 aaKnown RBP2.69□□□□□ -1.98
CCDC66-221ENST00000487739 WI2-2373I1.2A0A1W2PRP0 233 aa2.68□□□□□ -1.98
CCDC66-221ENST00000487739 ZNF487B1APH4 448 aa2.68□□□□□ -1.98
CCDC66-221ENST00000487739 HMGB1P1B2RPK0 211 aaPredicted RBP2.68□□□□□ -1.98
CCDC66-221ENST00000487739 ANHXE9PGG2 379 aa2.68□□□□□ -1.98
CCDC66-221ENST00000487739 P4HA2O15460 535 aa2.68□□□□□ -1.98
CCDC66-221ENST00000487739 FGF19O95750 216 aa2.68□□□□□ -1.98
CCDC66-221ENST00000487739 ELK1P19419 428 aa2.68□□□□□ -1.98
CCDC66-221ENST00000487739 IL11P20809 199 aa2.68□□□□□ -1.98
CCDC66-221ENST00000487739 PSMA3P25788 255 aa2.68□□□□□ -1.98
CCDC66-221ENST00000487739 KRT20P35900 424 aa2.68□□□□□ -1.98
CCDC66-221ENST00000487739 SLC1A3P43003 542 aa2.68□□□□□ -1.98
CCDC66-221ENST00000487739 CDX1P47902 265 aaPredicted RBP2.68□□□□□ -1.98
CCDC66-221ENST00000487739 MZT1Q08AG7 82 aa2.68□□□□□ -1.98
CCDC66-221ENST00000487739 NHLRC1Q6VVB1 395 aa2.68□□□□□ -1.98
CCDC66-221ENST00000487739 APCDD1Q8J025 514 aa2.68□□□□□ -1.98
CCDC66-221ENST00000487739 ZBED6CLQ96FA7 236 aaPredicted RBP2.68□□□□□ -1.98
CCDC66-221ENST00000487739 AK8Q96MA6 479 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms