RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 NDNQ99608 321 aa14.24□□□□□ -0.13
MCF2L-228ENST00000487354 CNPPD1Q9BV87 410 aa14.24□□□□□ -0.13
MCF2L-228ENST00000487354 CLK4Q9HAZ1 481 aaKnown RBP14.24□□□□□ -0.13
MCF2L-228ENST00000487354 DMRT3Q9NQL9 472 aa14.24□□□□□ -0.13
MCF2L-228ENST00000487354 YARS2Q9Y2Z4 477 aaKnown RBP14.24□□□□□ -0.13
MCF2L-228ENST00000487354 COMMD10Q9Y6G5 202 aa14.24□□□□□ -0.13
MCF2L-228ENST00000487354 JMJD1CQ15652 2540 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 FIGNL2A6NMB9 653 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 A6NNC1 897 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 AQP7O14520 342 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 SERPIND1P05546 499 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 AHRP35869 848 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 HNF4AP41235 474 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 SKP1P63208 163 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 RGS1Q08116 209 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 KIF5AQ12840 1032 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 SLC25A35Q3KQZ1 300 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 UGT3A1Q6NUS8 523 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 NIPAL1Q6NVV3 410 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 PAOXQ6QHF9 649 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 RGS9BPQ6ZS82 235 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 Q71RC1 249 aaPredicted RBP14.23□□□□□ -0.13
MCF2L-228ENST00000487354 GPALPP1Q8IXQ4 340 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 MYRIPQ8NFW9 859 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 SCYL1Q96KG9 808 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 RASL10BQ96S79 203 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 SH3GL2Q99962 352 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 HAUS8Q9BT25 410 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 TSGA10Q9BZW7 698 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 CCDC68Q9H2F9 335 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 RHBGQ9H310 441 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 TRMT1Q9NXH9 659 aaKnown RBP14.23□□□□□ -0.13
MCF2L-228ENST00000487354 SPRR3Q9UBC9 169 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 FBXO5Q9UKT4 447 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 IKZF3Q9UKT9 509 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 CBLCQ9ULV8 474 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 MMACHCQ9Y4U1 282 aa14.23□□□□□ -0.13
MCF2L-228ENST00000487354 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.22□□□□□ -0.13
MCF2L-228ENST00000487354 A8MVJ9 347 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 ACOT7O00154 380 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 ATE1O95260 518 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 DNASE1P24855 282 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 GABRB3P28472 473 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 MAGEA3P43357 314 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 KIR2DL3P43628 341 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 PGGT1BP53609 377 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 CDKN2DP55273 166 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 PLGLB1Q02325 96 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 THOC5Q13769 683 aaKnown RBP14.22□□□□□ -0.13
MCF2L-228ENST00000487354 RUNX2Q13950 521 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 TRIP13Q15645 432 aaPredicted RBP14.22□□□□□ -0.13
MCF2L-228ENST00000487354 HYAL4Q2M3T9 481 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 ZNF750Q32MQ0 723 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 RBM20Q5T481 1227 aaKnown RBP14.22□□□□□ -0.13
MCF2L-228ENST00000487354 C1orf185Q5T7R7 199 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 DUPD1Q68J44 220 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 CASC4Q6P4E1 433 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 ADGRD1Q6QNK2 874 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 PAQR3Q6TCH7 311 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 IL20RBQ6UXL0 311 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 SLC22A16Q86VW1 577 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 FAM109AQ8N4B1 249 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 ZNF321PQ8N8H1 164 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 SLC5A11Q8WWX8 675 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 SREK1Q8WXA9 508 aaKnown RBP14.22□□□□□ -0.13
MCF2L-228ENST00000487354 ARSGQ96EG1 525 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 SEMA4BQ9NPR2 832 aaPredicted RBP14.22□□□□□ -0.13
MCF2L-228ENST00000487354 PNO1Q9NRX1 252 aaKnown RBP14.22□□□□□ -0.13
MCF2L-228ENST00000487354 HPF1Q9NWY4 346 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 MYOTQ9UBF9 498 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 TRMT6Q9UJA5 497 aaKnown RBP14.22□□□□□ -0.13
MCF2L-228ENST00000487354 ERVK-11Q9UQG0 969 aa14.22□□□□□ -0.13
MCF2L-228ENST00000487354 ZANQ9Y493 2812 aa14.21□□□□□ -0.13
MCF2L-228ENST00000487354 KDM4EB2RXH2 506 aaPredicted RBP14.21□□□□□ -0.13
MCF2L-228ENST00000487354 WDR1O75083 606 aa14.21□□□□□ -0.13
MCF2L-228ENST00000487354 TBX6O95947 436 aaPredicted RBP14.21□□□□□ -0.13
MCF2L-228ENST00000487354 ZNF75DP51815 510 aa14.21□□□□□ -0.13
MCF2L-228ENST00000487354 HK2P52789 917 aa14.21□□□□□ -0.13
MCF2L-228ENST00000487354 RIPPLY2Q5TAB7 128 aa14.21□□□□□ -0.13
MCF2L-228ENST00000487354 NDUFAF5Q5TEU4 345 aa14.21□□□□□ -0.13
MCF2L-228ENST00000487354 LRRC8EQ6NSJ5 796 aa14.21□□□□□ -0.13
MCF2L-228ENST00000487354 POMZP3Q6PJE2 187 aa14.21□□□□□ -0.13
MCF2L-228ENST00000487354 WDR53Q7Z5U6 358 aaPredicted RBP14.21□□□□□ -0.13
MCF2L-228ENST00000487354 BIVMQ86UB2 503 aa14.21□□□□□ -0.13
MCF2L-228ENST00000487354 NAXEQ8NCW5 288 aa14.21□□□□□ -0.13
MCF2L-228ENST00000487354 ASB15Q8WXK1 588 aa14.21□□□□□ -0.13
MCF2L-228ENST00000487354 FBXL8Q96CD0 374 aa14.21□□□□□ -0.13
MCF2L-228ENST00000487354 LINGO1Q96FE5 620 aa14.21□□□□□ -0.13
MCF2L-228ENST00000487354 TSNARE1Q96NA8 513 aa14.21□□□□□ -0.13
MCF2L-228ENST00000487354 SERPINB12Q96P63 405 aa14.21□□□□□ -0.13
MCF2L-228ENST00000487354 IL1RL2Q9HB29 575 aa14.21□□□□□ -0.13
MCF2L-228ENST00000487354 TUBA8Q9NY65 449 aaPredicted RBP14.21□□□□□ -0.13
MCF2L-228ENST00000487354 DOCK7Q96N67 2140 aa14.21□□□□□ -0.13
MCF2L-228ENST00000487354 NINQ8N4C6 2090 aa14.21□□□□□ -0.14
MCF2L-228ENST00000487354 PSMD12O00232 456 aaPredicted RBP14.2□□□□□ -0.14
MCF2L-228ENST00000487354 WWP2O00308 870 aa14.2□□□□□ -0.14
MCF2L-228ENST00000487354 SYT5O00445 386 aa14.2□□□□□ -0.14
MCF2L-228ENST00000487354 ZFAND5O76080 213 aa14.2□□□□□ -0.14
MCF2L-228ENST00000487354 CCL3P10147 92 aa14.2□□□□□ -0.14
MCF2L-228ENST00000487354 HOXC12P31275 282 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms