RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 EZRP15311 586 aaKnown RBP3.94□□□□□ -1.78
SMC4-218ENST00000486711 ZNF18P17022 549 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 STIP1P31948 543 aaKnown RBP3.94□□□□□ -1.78
SMC4-218ENST00000486711 FEN1P39748 380 aaKnown RBP3.94□□□□□ -1.78
SMC4-218ENST00000486711 MMP12P39900 470 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 HUNKP57058 714 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 TSTA3Q13630 321 aaPredicted RBP3.94□□□□□ -1.78
SMC4-218ENST00000486711 GIT2Q14161 759 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 ADAMTSL4-AS1Q5T5F5 129 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 SNRNP48Q6IEG0 339 aaKnown RBP3.94□□□□□ -1.78
SMC4-218ENST00000486711 RAB12Q6IQ22 244 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 BHLHB9Q6PI77 547 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 ZER1Q7Z7L7 766 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 SLC43A2Q8N370 569 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 OR8H1Q8NGG4 311 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 RNASE8Q8TDE3 154 aaKnown RBP3.94□□□□□ -1.78
SMC4-218ENST00000486711 SLC35C1Q96A29 364 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 ZNF560Q96MR9 790 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 USP28Q96RU2 1077 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 RUFY1Q96T51 708 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 KRT12Q99456 494 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 SYT15Q9BQS2 421 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 TEX13AQ9BXU3 409 aaPredicted RBP3.94□□□□□ -1.78
SMC4-218ENST00000486711 ZDHHC6Q9H6R6 413 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 MARCH7Q9H992 704 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 GPN1Q9HCN4 374 aaPredicted RBP3.94□□□□□ -1.78
SMC4-218ENST00000486711 FGF22Q9HCT0 170 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 PLCXD1Q9NUJ7 323 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 KLHL8Q9P2G9 620 aaPredicted RBP3.94□□□□□ -1.78
SMC4-218ENST00000486711 IL19Q9UHD0 177 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 EXOC7Q9UPT5 735 aa3.94□□□□□ -1.78
SMC4-218ENST00000486711 GPRASP1Q5JY77 1395 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 IGKV3D-20A0A0C4DH25 116 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 A0A1B0GVY2 172 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 GTPBP10A4D1E9 387 aaKnown RBP3.93□□□□□ -1.78
SMC4-218ENST00000486711 RTCAO00442 366 aaKnown RBP3.93□□□□□ -1.78
SMC4-218ENST00000486711 CHRNGP07510 517 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 ABHD2P08910 425 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 SKILP12757 684 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 UGT1A6P19224 532 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 TYMPP19971 482 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 C4BPBP20851 252 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 ACKR3P25106 362 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 SLC6A12P48065 614 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 CYCSP99999 105 aaKnown RBP3.93□□□□□ -1.78
SMC4-218ENST00000486711 PPP1R8Q12972 351 aaKnown RBP3.93□□□□□ -1.78
SMC4-218ENST00000486711 GPR50Q13585 617 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 PDE7AQ13946 482 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 SPHARQ15513 63 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 MTHFSDQ2M296 383 aaKnown RBP3.93□□□□□ -1.78
SMC4-218ENST00000486711 ZFP69Q49AA0 526 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 CCDC92Q53HC0 331 aaPredicted RBP3.93□□□□□ -1.78
SMC4-218ENST00000486711 BSPRYQ5W0U4 402 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 TMEM64Q6YI46 380 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 RABEPKQ7Z6M1 372 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 SLC22A15Q8IZD6 547 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 FBXW8Q8N3Y1 598 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 NEK11Q8NG66 645 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 RPLP0P6Q8NHW5 317 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 CCM2Q9BSQ5 444 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 SPXQ9BT56 116 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 PAPOLGQ9BWT3 736 aaKnown RBP3.93□□□□□ -1.78
SMC4-218ENST00000486711 TNMDQ9H2S6 317 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 TMEM245Q9H330 911 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 S100A14Q9HCY8 104 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 SPHK2Q9NRA0 654 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 ANO10Q9NW15 660 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 PLEK2Q9NYT0 353 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 ZNF319Q9P2F9 582 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 UBQLN2Q9UHD9 624 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 TSPAN16Q9UKR8 245 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 ODF2LQ9ULJ1 636 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 PYGO1Q9Y3Y4 419 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 CSNK1G3Q9Y6M4 447 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 ABCC9O60706 1549 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 RPGRIP1LQ68CZ1 1315 aa3.93□□□□□ -1.78
SMC4-218ENST00000486711 SLC28A1O00337 649 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 CEACAM4O75871 244 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 BCAS2O75934 225 aaPredicted RBP3.92□□□□□ -1.78
SMC4-218ENST00000486711 RPLP0P05388 317 aaKnown RBP3.92□□□□□ -1.78
SMC4-218ENST00000486711 SFTPBP07988 381 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 MMP10P09238 476 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 NUDT17P0C025 328 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 ODC1P11926 461 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 AREGP15514 252 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 GJB2P29033 226 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 OPRL1P41146 370 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 IRX4P78413 519 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 DHODHQ02127 395 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 GABPAQ06546 454 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 WASHC5Q12768 1159 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 KRT31Q15323 416 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 STX1AQ16623 288 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 SPANXN4Q5MJ08 99 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 PLPP4Q5VZY2 271 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 CES4AQ5XG92 561 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 CNSTQ6PJW8 725 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 Q6ZVQ6 151 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 CYP4V2Q6ZWL3 525 aaPredicted RBP3.92□□□□□ -1.78
SMC4-218ENST00000486711 Q71RC1 249 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms