RNA–Protein interactions for RNA: ENST00000485967.1

SCAP-211, Transcript of SREBF chaperone, human

TSL 2

Gene SCAP, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAP-211	ENST00000485967	SERINC2	Q96SA4	455 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	AICDA	Q9GZX7	198 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	SLC26A1	Q9H2B4	701 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	SOX17	Q9H6I2	414 aa	Predicted RBP	13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	WDR54	Q9H977	334 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	FARSB	Q9NSD9	589 aa	Known RBP	13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	SCN3A	Q9NY46	2000 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	CTSF	Q9UBX1	484 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	NXT1	Q9UKK6	140 aa	Known RBP	13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	SLC12A4	Q9UP95	1085 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	FIS1	Q9Y3D6	152 aa		13.09	□□□□□ -0.31
SCAP-211	ENST00000485967	TMEM114	B3SHH9	223 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	PSMD12	O00232	456 aa	Predicted RBP	13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	TERT	O14746	1132 aa	Known RBP	13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	AZIN1	O14977	448 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	ATP8B1	O43520	1251 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	TBX6	O95947	436 aa	Predicted RBP	13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	CHRNG	P07510	517 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	ZGLP1	P0C6A0	271 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	PRKAR1A	P10644	381 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	RNH1	P13489	461 aa	Known RBP	13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	HSD3B1	P14060	373 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	BGN	P21810	368 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	HSD3B2	P26439	372 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	SERPINB3	P29508	390 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	WDR4	P57081	412 aa	Known RBP	13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	ABCE1	P61221	599 aa	Known RBP	13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	OLR1	P78380	273 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	ZNF33B	Q06732	778 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	VAC14	Q08AM6	782 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	GALNT1	Q10472	559 aa	Predicted RBP	13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	ERV3-1	Q14264	604 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	IMPG1	Q17R60	797 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	TCHHL1	Q5QJ38	904 aa	Predicted RBP	13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	OR4C11	Q6IEV9	310 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	SCIMP	Q6UWF3	145 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	GBP7	Q8N8V2	638 aa	Predicted RBP	13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	OR5T3	Q8NGG3	340 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	OR2Y1	Q8NGV0	311 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	WBP1	Q96G27	269 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	PEX11G	Q96HA9	241 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	NPL	Q9BXD5	320 aa	Predicted RBP	13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	BRF2	Q9HAW0	419 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	PRDM7	Q9NQW5	492 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	C14orf105	Q9NVL8	296 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	PPT2	Q9UMR5	302 aa		13.08	□□□□□ -0.32
SCAP-211	ENST00000485967	CDC14C	A4D256	554 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	VSTM2B	A6NLU5	285 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	C4orf51	C9J302	202 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	RTCA	O00442	366 aa	Known RBP	13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	NKX2-8	O15522	239 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	HEXB	P07686	556 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	IL10	P22301	178 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	ATP5A1	P25705	553 aa	Known RBP	13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	OTX2	P32243	289 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	XCR1	P46094	333 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	SLC1A6	P48664	564 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	EMP2	P54851	167 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	FOXA1	P55317	472 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	PPP2R2A	P63151	447 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	CSTF3	Q12996	717 aa	Known RBP	13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	RUNX2	Q13950	521 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	SSPN	Q14714	243 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	ABRAXAS2	Q15018	415 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	MINDY4	Q4G0A6	757 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	SH2D4B	Q5SQS7	431 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	FAM69B	Q5VUD6	431 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	ATG16L1	Q676U5	607 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	CLEC6A	Q6EIG7	209 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	UBE3D	Q7Z6J8	389 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	ZNF605	Q86T29	641 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	CLYBL	Q8N0X4	340 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	AGR3	Q8TD06	166 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	DYDC1	Q8WWB3	177 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	TTC9	Q92623	222 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	QRFPR	Q96P65	431 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	HBEGF	Q99075	208 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	CRB3	Q9BUF7	120 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	SEMA4C	Q9C0C4	833 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	VPS29	Q9UBQ0	182 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	MKL2	Q9ULH7	1088 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	TRAF6	Q9Y4K3	522 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	SPACA6	W5XKT8	324 aa		13.07	□□□□□ -0.32
SCAP-211	ENST00000485967	IGLV3-12	A0A075B6K2	115 aa		13.06	□□□□□ -0.32
SCAP-211	ENST00000485967	ARHGAP10	A1A4S6	786 aa		13.06	□□□□□ -0.32
SCAP-211	ENST00000485967		K7ENP7	123 aa		13.06	□□□□□ -0.32
SCAP-211	ENST00000485967	PLPP1	O14494	284 aa		13.06	□□□□□ -0.32
SCAP-211	ENST00000485967	DYNC1I1	O14576	645 aa		13.06	□□□□□ -0.32
SCAP-211	ENST00000485967	CNOT3	O75175	753 aa	Known RBP	13.06	□□□□□ -0.32
SCAP-211	ENST00000485967	DNAJB6	O75190	326 aa		13.06	□□□□□ -0.32
SCAP-211	ENST00000485967	LYPLA1	O75608	230 aa	Predicted RBP	13.06	□□□□□ -0.32
SCAP-211	ENST00000485967	KLF7	O75840	302 aa	Predicted RBP	13.06	□□□□□ -0.32
SCAP-211	ENST00000485967	SEMA3D	O95025	777 aa		13.06	□□□□□ -0.32
SCAP-211	ENST00000485967	SNUPN	O95149	360 aa	Known RBP	13.06	□□□□□ -0.32
SCAP-211	ENST00000485967	BMP10	O95393	424 aa		13.06	□□□□□ -0.32
SCAP-211	ENST00000485967	ETHE1	O95571	254 aa		13.06	□□□□□ -0.32
SCAP-211	ENST00000485967	RECK	O95980	971 aa		13.06	□□□□□ -0.32
SCAP-211	ENST00000485967	IGHE	P01854	428 aa		13.06	□□□□□ -0.32
SCAP-211	ENST00000485967	FGF4	P08620	206 aa		13.06	□□□□□ -0.32
SCAP-211	ENST00000485967	WT1	P19544	449 aa	Predicted RBP	13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms