RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 DYTNA2CJ06 578 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 TGFBR3LH3BV60 316 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 KLK8O60259 260 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 MAN1A2O60476 641 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 ABHD2P08910 425 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 ICAM2P13598 275 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 EEF1DP29692 281 aaKnown RBP11.52□□□□□ -0.57
MSH5-216ENST00000484309 PPP2R1BP30154 601 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 ARL1P40616 181 aaPredicted RBP11.52□□□□□ -0.57
MSH5-216ENST00000484309 CASP2P42575 452 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 PIK3CGP48736 1102 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 RAB38P57729 211 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 SLC26A5P58743 744 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 SRSF11Q05519 484 aaKnown RBP11.52□□□□□ -0.57
MSH5-216ENST00000484309 SRSF1Q07955 248 aaKnown RBP eCLIP11.52□□□□□ -0.578e-9■■■□□ 18.1
MSH5-216ENST00000484309 E2F2Q14209 437 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 PCBP2Q15366 365 aaKnown RBP eCLIP11.52□□□□□ -0.57
MSH5-216ENST00000484309 TLR1Q15399 786 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 ABHD17BQ5VST6 288 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 FAM219BQ5XKK7 198 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 ZNF793Q6ZN11 406 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 RPS27LQ71UM5 84 aaKnown RBP11.52□□□□□ -0.57
MSH5-216ENST00000484309 TRMT10CQ7L0Y3 403 aaKnown RBP11.52□□□□□ -0.57
MSH5-216ENST00000484309 UBE3DQ7Z6J8 389 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 CRLF3Q8IUI8 442 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 LAS2Q8IYD9 372 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 BEST3Q8N1M1 668 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 KIF2BQ8N4N8 673 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 OR7G3Q8NG95 312 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 SEC16BQ96JE7 1060 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 CDK15Q96Q40 435 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 SERINC2Q96SA4 455 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 MTERF1Q99551 399 aaKnown RBP11.52□□□□□ -0.57
MSH5-216ENST00000484309 NPAS2Q99743 824 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 SORBS1Q9BX66 1292 aaKnown RBP11.52□□□□□ -0.57
MSH5-216ENST00000484309 SLC29A3Q9BZD2 475 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.52□□□□□ -0.57
MSH5-216ENST00000484309 OR51B5Q9H339 312 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 IPPKQ9H8X2 491 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 PRDM9Q9NQV7 894 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 PRDM7Q9NQW5 492 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 PRTFDC1Q9NRG1 225 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 ZNF180Q9UJW8 692 aa11.52□□□□□ -0.57
MSH5-216ENST00000484309 ASH1LQ9NR48 2969 aaKnown RBP11.52□□□□□ -0.57
MSH5-216ENST00000484309 A0A088AWK7 358 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 IGKV3D-11A0A0A0MRZ8 115 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 TCRBV16S1A1N1A0A5B0 115 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 E2F3O00716 465 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 SMIM24O75264 130 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 SNRPAP09012 282 aaKnown RBP11.51□□□□□ -0.57
MSH5-216ENST00000484309 RBP1P09455 135 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 ZNF10P21506 573 aaPredicted RBP11.51□□□□□ -0.57
MSH5-216ENST00000484309 CNTFP26441 200 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 SSR2P43308 183 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 TSFMP43897 325 aaKnown RBP11.51□□□□□ -0.57
MSH5-216ENST00000484309 TNFSF10P50591 281 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 MTTPP55157 894 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 LIM2P55344 173 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 AP2B1P63010 937 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 TGM3Q08188 693 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 SLC13A2Q13183 592 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 SLC29A2Q14542 456 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 EXT1Q16394 746 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 CPSF6Q16630 551 aaKnown RBP eCLIP11.51□□□□□ -0.57
MSH5-216ENST00000484309 TSNAXIP1Q2TAA8 658 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 EIF2S3LQ2VIR3 472 aaKnown RBP11.51□□□□□ -0.57
MSH5-216ENST00000484309 ARMC2Q8NEN0 867 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 HUS1BQ8NHY5 278 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 M1APQ8TC57 530 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 GRHL3Q8TE85 626 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 SREK1Q8WXA9 508 aaKnown RBP11.51□□□□□ -0.57
MSH5-216ENST00000484309 UBE2E3Q969T4 207 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 NSUN5Q96P11 429 aaKnown RBP11.51□□□□□ -0.57
MSH5-216ENST00000484309 MAPKAP1Q9BPZ7 522 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 NPLQ9BXD5 320 aaPredicted RBP11.51□□□□□ -0.57
MSH5-216ENST00000484309 TXLNGYQ9BZA5 131 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 EPB41L4BQ9H329 900 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 NOL11Q9H8H0 719 aaKnown RBP11.51□□□□□ -0.57
MSH5-216ENST00000484309 CLK4Q9HAZ1 481 aaKnown RBP11.51□□□□□ -0.57
MSH5-216ENST00000484309 MMP25Q9NPA2 562 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 PNO1Q9NRX1 252 aaKnown RBP11.51□□□□□ -0.57
MSH5-216ENST00000484309 ANKRD10Q9NXR5 420 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 STMN3Q9NZ72 180 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 TBK1Q9UHD2 729 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 FBXW2Q9UKT8 454 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 DAPP1Q9UN19 280 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 RNF11Q9Y3C5 154 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 CROCCQ5TZA2 2017 aa11.51□□□□□ -0.57
MSH5-216ENST00000484309 CCDC189A1A4V9 331 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 SAGE2PA6NJ88 616 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 FOXO6A8MYZ6 492 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 GOLGA8RI6L899 631 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 OR7A17O14581 309 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 MYO1DO94832 1006 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 SBK3P0C264 359 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 TSPAN8P19075 237 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 ATP5A1P25705 553 aaKnown RBP11.5□□□□□ -0.57
MSH5-216ENST00000484309 HPDP32754 393 aaPredicted RBP11.5□□□□□ -0.57
MSH5-216ENST00000484309 RAP1GDS1P52306 607 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 RPS13P62277 151 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms