RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 LPCAT3Q6P1A2 487 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 PIAS4Q8N2W9 510 aaPredicted RBP5.26□□□□□ -1.57
USF3-202ENST00000478658 GPR156Q8NFN8 814 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 OR56A1Q8NGH5 318 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 ACTL9Q8TC94 416 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 STK35Q8TDR2 534 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 ATXN2LQ8WWM7 1075 aaKnown RBP5.26□□□□□ -1.57
USF3-202ENST00000478658 FEM1CQ96JP0 617 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 ZNF597Q96LX8 424 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 ZNF681Q96N22 645 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 ACBD6Q9BR61 282 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 HOXD1Q9GZZ0 328 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 TPT1P8Q9HAU6 139 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 PIH1D1Q9NWS0 290 aaKnown RBP5.26□□□□□ -1.57
USF3-202ENST00000478658 RNF181Q9P0P0 153 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 KIAA1456Q9P272 454 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 DISP2A7MBM2 1401 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 FABP12A6NFH5 140 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 FOXE1O00358 373 aaPredicted RBP5.26□□□□□ -1.57
USF3-202ENST00000478658 C2CD2LO14523 706 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 NME6O75414 186 aaPredicted RBP5.26□□□□□ -1.57
USF3-202ENST00000478658 TRAPPC6AO75865 159 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 IL1BP01584 269 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 APOA2P02652 100 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 SBK2P0C263 348 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 SCGB1A1P11684 91 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 RAB6AP20340 208 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 BMP8BP34820 402 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 KCNJ3P48549 501 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 CXCR3P49682 368 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 ZNF132P52740 706 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 NUBP1P53384 320 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 NADK2Q4G0N4 442 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 IFI44LQ53G44 452 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 SLC22A25Q6T423 547 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 EEPD1Q7L9B9 569 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 BMP8AQ7Z5Y6 402 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 FAM131BQ86XD5 332 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 TCF12Q99081 682 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 CDCA3Q99618 268 aaPredicted RBP5.26□□□□□ -1.57
USF3-202ENST00000478658 SEMA4CQ9C0C4 833 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 RNF19AQ9NV58 838 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 MMACHCQ9Y4U1 282 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 PCDHA9Q9Y5H5 950 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 LRRN3E7EW58 273 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 TBX1O43435 398 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 NMT2O60551 498 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 IMPDH1P20839 514 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 DHPSP49366 369 aaPredicted RBP5.26□□□□□ -1.57
USF3-202ENST00000478658 MPP1Q00013 466 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 ZNF816Q0VGE8 651 aaPredicted RBP5.26□□□□□ -1.57
USF3-202ENST00000478658 LASP1Q14847 261 aaKnown RBP5.26□□□□□ -1.57
USF3-202ENST00000478658 SSX2Q16385 188 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 PARP15Q460N3 678 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 SLC22A10Q63ZE4 541 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 NOXRED1Q6NXP6 359 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 MFSD4AQ8N468 514 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 BEST4Q8NFU0 473 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 OR2M7Q8NG81 312 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 ZNF606Q8WXB4 792 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 NUSAP1Q9BXS6 441 aaKnown RBP5.26□□□□□ -1.57
USF3-202ENST00000478658 DPEP2Q9H4A9 486 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 TMEM231Q9H6L2 316 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 BARHL2Q9NY43 387 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 P2RX2Q9UBL9 471 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 VIRMAQ69YN4 1812 aaKnown RBP5.26□□□□□ -1.57
USF3-202ENST00000478658 HMGXB3Q12766 1538 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 DNM1LO00429 736 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 MSTNO14793 375 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 SSX5O60225 188 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 IGFBP4P22692 258 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 AKR1C2P52895 323 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 BLOC1S1P78537 153 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 CNN3Q15417 329 aaKnown RBP5.26□□□□□ -1.57
USF3-202ENST00000478658 Q4G0T1 1027 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 IQCCQ4KMZ1 466 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 TMEM71Q6P5X7 295 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 ZNF571Q7Z3V5 609 aaPredicted RBP5.26□□□□□ -1.57
USF3-202ENST00000478658 TMEM173Q86WV6 379 aaPredicted RBP5.26□□□□□ -1.57
USF3-202ENST00000478658 KLBQ86Z14 1044 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 ZFP82Q8N141 532 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 OR10H4Q8NGA5 316 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 OR4M1Q8NGD0 313 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 CD200R1Q8TD46 325 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 KCTD13Q8WZ19 329 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 OR5P2Q8WZ92 322 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 OR52E6Q96RD3 313 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 RDH14Q9HBH5 336 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 Q9N2J8 555 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 GAR1Q9NY12 217 aaKnown RBP5.26□□□□□ -1.57
USF3-202ENST00000478658 NUDT4Q9NZJ9 180 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 NOS1P29475 1434 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 UNC5CO95185 931 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 NPPAP01160 153 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 LTFP02788 710 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 LGALS4P56470 323 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 Q1RN00 199 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 PDLIM3Q53GG5 364 aaPredicted RBP5.26□□□□□ -1.57
USF3-202ENST00000478658 C11orf63Q6NUN7 778 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 MED27Q6P2C8 311 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms