RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 FAM69BQ5VUD6 431 aa25.3■■□□□ 1.64
CCM2-211ENST00000478582 MED25Q71SY5 747 aa25.3■■□□□ 1.64
CCM2-211ENST00000478582 OR5T3Q8NGG3 340 aa25.3■■□□□ 1.64
CCM2-211ENST00000478582 APOBEC4Q8WW27 367 aaKnown RBP25.3■■□□□ 1.64
CCM2-211ENST00000478582 SELENOMQ8WWX9 145 aa25.3■■□□□ 1.64
CCM2-211ENST00000478582 RGMAQ96B86 450 aa25.3■■□□□ 1.64
CCM2-211ENST00000478582 OR1F2PQ96R84 312 aa25.3■■□□□ 1.64
CCM2-211ENST00000478582 SERINC2Q96SA4 455 aa25.3■■□□□ 1.64
CCM2-211ENST00000478582 PRM3Q9NNZ6 103 aa25.3■■□□□ 1.64
CCM2-211ENST00000478582 SERTM1A2A2V5 107 aa25.29■■□□□ 1.64
CCM2-211ENST00000478582 ETHE1O95571 254 aa25.29■■□□□ 1.64
CCM2-211ENST00000478582 HSD3B1P14060 373 aa25.29■■□□□ 1.64
CCM2-211ENST00000478582 HSD3B2P26439 372 aa25.29■■□□□ 1.64
CCM2-211ENST00000478582 XCR1P46094 333 aa25.29■■□□□ 1.64
CCM2-211ENST00000478582 HOMEZQ8IX15 550 aa25.29■■□□□ 1.64
CCM2-211ENST00000478582 SOX17Q9H6I2 414 aaPredicted RBP25.29■■□□□ 1.64
CCM2-211ENST00000478582 SEMA3GQ9NS98 782 aa25.29■■□□□ 1.64
CCM2-211ENST00000478582 FARSBQ9NSD9 589 aaKnown RBP25.29■■□□□ 1.64
CCM2-211ENST00000478582 TUBD1Q9UJT1 453 aa25.29■■□□□ 1.64
CCM2-211ENST00000478582 A0A0G2JN53 185 aa25.28■■□□□ 1.64
CCM2-211ENST00000478582 B3GALT2O43825 422 aa25.28■■□□□ 1.64
CCM2-211ENST00000478582 SH3BGRLO75368 114 aa25.28■■□□□ 1.64
CCM2-211ENST00000478582 ULK1O75385 1050 aa25.28■■□□□ 1.64
CCM2-211ENST00000478582 SEMA3DO95025 777 aa25.28■■□□□ 1.64
CCM2-211ENST00000478582 IGHEP01854 428 aa25.28■■□□□ 1.64
CCM2-211ENST00000478582 CYC1P08574 325 aa25.28■■□□□ 1.64
CCM2-211ENST00000478582 FURINP09958 794 aa25.28■■□□□ 1.64
CCM2-211ENST00000478582 FOXL2P58012 376 aa25.28■■□□□ 1.64
CCM2-211ENST00000478582 RCN2Q14257 317 aa25.28■■□□□ 1.64
CCM2-211ENST00000478582 AP5B1Q2VPB7 878 aa25.28■■□□□ 1.64
CCM2-211ENST00000478582 TTMPQ5BVD1 217 aa25.28■■□□□ 1.64
CCM2-211ENST00000478582 SGO1Q5FBB7 561 aa25.28■■□□□ 1.64
CCM2-211ENST00000478582 OR4C11Q6IEV9 310 aa25.28■■□□□ 1.64
CCM2-211ENST00000478582 LAPTM4BQ86VI4 370 aa25.28■■□□□ 1.64
CCM2-211ENST00000478582 TMEM151BQ8IW70 566 aa25.28■■□□□ 1.64
CCM2-211ENST00000478582 SHISA5Q8N114 240 aa25.28■■□□□ 1.64
CCM2-211ENST00000478582 CA13Q8N1Q1 262 aa25.28■■□□□ 1.64
CCM2-211ENST00000478582 GOLGA6L1Q8N7Z2 621 aa25.28■■□□□ 1.64
CCM2-211ENST00000478582 THAP4Q8WY91 577 aa25.28■■□□□ 1.64
CCM2-211ENST00000478582 IP6K3Q96PC2 410 aa25.28■■□□□ 1.64
CCM2-211ENST00000478582 KCNA7Q96RP8 456 aa25.28■■□□□ 1.64
CCM2-211ENST00000478582 COPS7BQ9H9Q2 264 aaPredicted RBP25.28■■□□□ 1.64
CCM2-211ENST00000478582 TIMM22Q9Y584 194 aa25.28■■□□□ 1.64
CCM2-211ENST00000478582 SCN3AQ9NY46 2000 aa25.27■■□□□ 1.64
CCM2-211ENST00000478582 CDC14CA4D256 554 aa25.27■■□□□ 1.64
CCM2-211ENST00000478582 PLPP1O14494 284 aa25.27■■□□□ 1.64
CCM2-211ENST00000478582 FGF4P08620 206 aa25.27■■□□□ 1.64
CCM2-211ENST00000478582 HIST1H1TP22492 207 aaPredicted RBP25.27■■□□□ 1.64
CCM2-211ENST00000478582 MMP11P24347 488 aa25.27■■□□□ 1.64
CCM2-211ENST00000478582 ATP5A1P25705 553 aaKnown RBP25.27■■□□□ 1.64
CCM2-211ENST00000478582 RAP1GDS1P52306 607 aa25.27■■□□□ 1.64
CCM2-211ENST00000478582 FOXA1P55317 472 aa25.27■■□□□ 1.64
CCM2-211ENST00000478582 WDR4P57081 412 aaKnown RBP25.27■■□□□ 1.64
CCM2-211ENST00000478582 OLR1P78380 273 aa25.27■■□□□ 1.64
CCM2-211ENST00000478582 NFATC3Q12968 1075 aa25.27■■□□□ 1.64
CCM2-211ENST00000478582 KCNAB2Q13303 367 aa25.27■■□□□ 1.64
CCM2-211ENST00000478582 RUNX2Q13950 521 aa25.27■■□□□ 1.64
CCM2-211ENST00000478582 ARL13AQ5H913 290 aaPredicted RBP25.27■■□□□ 1.64
CCM2-211ENST00000478582 TCHHL1Q5QJ38 904 aaPredicted RBP25.27■■□□□ 1.64
CCM2-211ENST00000478582 ZNF793Q6ZN11 406 aa25.27■■□□□ 1.64
CCM2-211ENST00000478582 ZCCHC23Q6ZST2 131 aa25.27■■□□□ 1.64
CCM2-211ENST00000478582 CUZD1Q86UP6 607 aa25.27■■□□□ 1.64
CCM2-211ENST00000478582 RAB43Q86YS6 212 aa25.27■■□□□ 1.64
CCM2-211ENST00000478582 ANKRD42Q8N9B4 389 aa25.27■■□□□ 1.64
CCM2-211ENST00000478582 ACOT4Q8N9L9 421 aa25.27■■□□□ 1.64
CCM2-211ENST00000478582 PEX11GQ96HA9 241 aa25.27■■□□□ 1.64
CCM2-211ENST00000478582 SLC25A18Q9H1K4 315 aa25.27■■□□□ 1.64
CCM2-211ENST00000478582 EML4Q9HC35 981 aaKnown RBP25.27■■□□□ 1.64
CCM2-211ENST00000478582 TNFRSF12AQ9NP84 129 aa25.27■■□□□ 1.64
CCM2-211ENST00000478582 ZNF446Q9NWS9 450 aa25.27■■□□□ 1.64
CCM2-211ENST00000478582 POLHQ9Y253 713 aa25.27■■□□□ 1.64
CCM2-211ENST00000478582 HMGB1P1B2RPK0 211 aaPredicted RBP25.26■■□□□ 1.63
CCM2-211ENST00000478582 SAP18O00422 153 aaKnown RBP25.26■■□□□ 1.63
CCM2-211ENST00000478582 RTCAO00442 366 aaKnown RBP25.26■■□□□ 1.63
CCM2-211ENST00000478582 UROSP10746 265 aa25.26■■□□□ 1.63
CCM2-211ENST00000478582 RNH1P13489 461 aaKnown RBP25.26■■□□□ 1.63
CCM2-211ENST00000478582 CERS1P27544 350 aa25.26■■□□□ 1.63
CCM2-211ENST00000478582 CSTF3Q12996 717 aaKnown RBP25.26■■□□□ 1.63
CCM2-211ENST00000478582 HHATQ5VTY9 493 aa25.26■■□□□ 1.63
CCM2-211ENST00000478582 FAM219BQ5XKK7 198 aa25.26■■□□□ 1.63
CCM2-211ENST00000478582 SHISA6Q6ZSJ9 500 aa25.26■■□□□ 1.63
CCM2-211ENST00000478582 ZCCHC7Q8N3Z6 543 aaKnown RBP25.26■■□□□ 1.63
CCM2-211ENST00000478582 GBP7Q8N8V2 638 aaPredicted RBP25.26■■□□□ 1.63
CCM2-211ENST00000478582 TBC1D20Q96BZ9 403 aa25.26■■□□□ 1.63
CCM2-211ENST00000478582 CRB3Q9BUF7 120 aa25.26■■□□□ 1.63
CCM2-211ENST00000478582 ZNF717Q9BY31 904 aaPredicted RBP25.26■■□□□ 1.63
CCM2-211ENST00000478582 LANCL2Q9NS86 450 aa25.26■■□□□ 1.63
CCM2-211ENST00000478582 NMRK1Q9NWW6 199 aa25.26■■□□□ 1.63
CCM2-211ENST00000478582 NKIRAS1Q9NYS0 192 aa25.26■■□□□ 1.63
CCM2-211ENST00000478582 C3orf18Q9UK00 162 aa25.26■■□□□ 1.63
CCM2-211ENST00000478582 KCNMB2Q9Y691 235 aa25.26■■□□□ 1.63
CCM2-211ENST00000478582 WDR91A4D1P6 747 aa25.25■■□□□ 1.63
CCM2-211ENST00000478582 IDSB3KWA1 339 aa25.25■■□□□ 1.63
CCM2-211ENST00000478582 PCDH17O14917 1159 aa25.25■■□□□ 1.63
CCM2-211ENST00000478582 SERPINE1P05121 402 aa25.25■■□□□ 1.63
CCM2-211ENST00000478582 CHRNGP07510 517 aa25.25■■□□□ 1.63
CCM2-211ENST00000478582 FHP07954 510 aa25.25■■□□□ 1.63
CCM2-211ENST00000478582 BSGP35613 385 aa25.25■■□□□ 1.63
CCM2-211ENST00000478582 SSR2P43308 183 aa25.25■■□□□ 1.63
CCM2-211ENST00000478582 EMP2P54851 167 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms