RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 NR0B1P51843 470 aaKnown RBP3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 RPS8P62241 208 aaKnown RBP3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 TRAP1Q12931 704 aaKnown RBP3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 GPR17Q13304 367 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 HERC3Q15034 1050 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 XKR6Q5GH73 641 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 XKR3Q5GH77 459 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 CCDC158Q5M9N0 1113 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 LCE3CQ5T5A8 94 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 BEND3Q5T5X7 828 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 C20orf194Q5TEA3 1177 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 PLBD1Q6P4A8 553 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 OLFM4Q6UX06 510 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 C15orf52Q6ZUT6 534 aaKnown RBP3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 USP50Q70EL3 339 aaPredicted RBP3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 G2E3Q7L622 706 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 CLYBLQ8N0X4 340 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 EID3Q8N140 333 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 ZNF383Q8NA42 475 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 TM9SF4Q92544 642 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 SGF29Q96ES7 293 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 ZNF354BQ96LW1 612 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 F2RL3Q96RI0 385 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 HNRNPABQ99729 332 aaKnown RBP3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 ATG101Q9BSB4 218 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 LSG1Q9H089 658 aaKnown RBP3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 SDCBP2Q9H190 292 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 SRD5A3Q9H8P0 318 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 IARS2Q9NSE4 1012 aaKnown RBP3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 P4HTMQ9NXG6 502 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 MAN1B1Q9UKM7 699 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 GPR132Q9UNW8 380 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 KLK4Q9Y5K2 254 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 ZBED9Q6R2W3 1325 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 CEP350Q5VT06 3117 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 MYH4Q9Y623 1939 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 C17orf105B2RV13 164 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 ECE2O60344 883 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 KRT33AO76009 404 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 UFL1O94874 794 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 MOCS2O96007 188 aaPredicted RBP3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 GH1P01241 217 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 ANKRD34CP0C6C1 535 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 C8orf89P0DMQ9 161 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 CD59P13987 128 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 HNF4AP41235 474 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 FKBP1AP62942 108 aaKnown RBP3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 FOLH1Q04609 750 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 IL10RBQ08334 325 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 C17orf67Q0P5P2 114 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 P2RY6Q15077 328 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 C2orf76Q3KRA6 126 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 TMEM30BQ3MIR4 351 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 RABL6Q3YEC7 729 aaPredicted RBP3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 IQCCQ4KMZ1 466 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 PRSS55Q6UWB4 352 aaPredicted RBP3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 TRPT1Q86TN4 253 aaKnown RBP3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 MEX3DQ86XN8 651 aaKnown RBP3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 KRTAP7-1Q8IUC3 87 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 CCDC60Q8IWA6 550 aaPredicted RBP3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 CARNMT1Q8N4J0 409 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 MARVELD2Q8N4S9 558 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 FAM76AQ8TAV0 307 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 UBE2Q2Q8WVN8 375 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 TSACCQ96A04 125 aaPredicted RBP3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 KLHL5Q96PQ7 755 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 CACNG6Q9BXT2 260 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 SHARPINQ9H0F6 387 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 BICC1Q9H694 974 aaKnown RBP3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 FBXL5Q9UKA1 691 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 GRID1Q9ULK0 1009 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 CHKBQ9Y259 395 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 RIPK3Q9Y572 518 aa3.59□□□□□ -1.83
CDC42BPA-212ENST00000478573 A0A0G2JMZ2 1700 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 TRBV5-5A0A0J9YX44 114 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 PMS2P5A8MQ11 134 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 CTDSPLO15194 276 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 RTN2O75298 545 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 GLRA3O75311 464 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 EDN1P05305 212 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 STAG3L1P0CL83 205 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 CEACAM8P31997 349 aaPredicted RBP3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 NPBWR1P48145 328 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 ARHGAP1Q07960 439 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 RCN2Q14257 317 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 CDC37Q16543 378 aaPredicted RBP3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 GPR33Q49SQ1 333 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 SLC35E4Q6ICL7 350 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 ZNF770Q6IQ21 691 aaPredicted RBP3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 KRTAP5-4Q6L8H1 288 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 UGT3A1Q6NUS8 523 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 PODNL1Q6PEZ8 512 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 RBMS3Q6XE24 437 aaKnown RBP3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 PIGZQ86VD9 579 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 ZNF843Q8N446 348 aa3.58□□□□□ -1.84
CDC42BPA-212ENST00000478573 STPG4Q8N801 248 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms