RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 DUSP8Q13202 625 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 GBX1Q14549 363 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 SF3B4Q15427 424 aaKnown RBP eCLIP6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 NFKBIBQ15653 356 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 P3H1Q32P28 736 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 UBAP2Q5T6F2 1119 aaKnown RBP6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 RNF187Q5TA31 235 aaPredicted RBP6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 CAPN13Q6MZZ7 669 aaPredicted RBP6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 DNM1P46Q6ZS02 220 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 H2AFVQ71UI9 128 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 LUZP2Q86TE4 346 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 ASPGQ86U10 573 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 LDB1Q86U70 411 aaPredicted RBP6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 RASGEF1CQ8N431 466 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 LIX1Q8N485 282 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 C9orf106Q8NAJ2 232 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 ZNF740Q8NDX6 193 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 OR4L1Q8NH43 312 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 TMEM171Q8WVE6 324 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 HAUS1Q96CS2 278 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 ALS2CR12Q96Q35 445 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 PANX3Q96QZ0 392 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 PACSIN1Q9BY11 444 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 FAM129AQ9BZQ8 928 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 P2RY12Q9H244 342 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 PROK2Q9HC23 129 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 ZFP64Q9NPA5 681 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 PIH1D1Q9NWS0 290 aaKnown RBP6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 QPCTLQ9NXS2 382 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 DDX56Q9NY93 547 aaKnown RBP6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 ZNF226Q9NYT6 803 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 SAMD15Q9P1V8 674 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 ZFATQ9P243 1243 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 SLC2A6Q9UGQ3 507 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 PCDHGA11Q9Y5H2 935 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 WIF1Q9Y5W5 379 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 C15orf38-AP3S2A0A0A6YYH1 394 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 LRRC3CA6NJW4 275 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 H7C0C1 242 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 GPRIN2O60269 458 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 PSIP1O75475 530 aaKnown RBP6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 P04436 131 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 SERPING1P05155 500 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 TMIGD3P0DMS9 266 aaPredicted RBP6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 ALOX12P18054 663 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 PPP2R1BP30154 601 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 SLCO1A2P46721 670 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 ATP5OP48047 213 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 CPA2P48052 419 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 TRPC1P48995 793 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 HK2P52789 917 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 EIF3BP55884 814 aaKnown RBP6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 MYL5Q02045 173 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 ACVR1Q04771 509 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 FAM27E3Q08E93 113 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 ETFDHQ16134 617 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 DEFB134Q4QY38 66 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 PDLIM3Q53GG5 364 aaPredicted RBP6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 ODF2Q5BJF6 829 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 C6orf52Q5T4I8 152 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 MEI1Q5TIA1 1274 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 HECTD2Q5U5R9 776 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 DMRTA1Q5VZB9 504 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 VASNQ6EMK4 673 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 PTRHD1Q6GMV3 140 aaKnown RBP6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 AFTPHQ6ULP2 937 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 SYDE1Q6ZW31 735 aaPredicted RBP6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 PM20D2Q8IYS1 436 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 ZNF441Q8N8Z8 693 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 FBXO15Q8NCQ5 510 aaPredicted RBP6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 PPHLN1Q8NEY8 458 aaKnown RBP6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 SLC35G2Q8TBE7 412 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 MRFAP1L1Q96HT8 127 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 ZNF778Q96MU6 729 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 PPP1R2P1Q96PQ5 205 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 TRIB1Q96RU8 372 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 SLC30A3Q99726 388 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 FERMT1Q9BQL6 677 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 CCDC77Q9BR77 488 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 SFXN3Q9BWM7 321 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 ANGPTL4Q9BY76 406 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 RBSNQ9H1K0 784 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 CLK4Q9HAZ1 481 aaKnown RBP6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 ABCF3Q9NUQ8 709 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 KLHL28Q9NXS3 571 aa6.71□□□□□ -1.34
SPTLC1-205ENST00000477888 hCG_1818297A0A087WSY0 165 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 A0A0G2JK05 382 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 SERINC4A6NH21 518 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 ZNF839A8K0R7 811 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 TGFBR3LH3BV60 316 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 OVOL3O00110 214 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 RCBTB2O95199 551 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 THBS1P07996 1170 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 RPS3P23396 243 aaKnown RBP eCLIP6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 ATP5DP30049 168 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 IDUAP35475 653 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 PPARGP37231 505 aaPredicted RBP6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 RPS6KA1Q15418 735 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 ZNF791Q3KP31 576 aaPredicted RBP6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 FASTKD1Q53R41 847 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms