RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	MLX	Q9UH92	298 aa		4.53	□□□□□ -1.68
PTCD3-212	ENST00000477520	ZDHHC2	Q9UIJ5	367 aa		4.53	□□□□□ -1.68
PTCD3-212	ENST00000477520	PURG	Q9UJV8	347 aa	Known RBP	4.53	□□□□□ -1.68
PTCD3-212	ENST00000477520	TINAG	Q9UJW2	476 aa		4.53	□□□□□ -1.68
PTCD3-212	ENST00000477520	SPATA2	Q9UM82	520 aa		4.53	□□□□□ -1.68
PTCD3-212	ENST00000477520	PLCL2	Q9UPR0	1127 aa		4.53	□□□□□ -1.68
PTCD3-212	ENST00000477520	BTRC	Q9Y297	605 aa		4.53	□□□□□ -1.68
PTCD3-212	ENST00000477520	EMC9	Q9Y3B6	208 aa		4.53	□□□□□ -1.68
PTCD3-212	ENST00000477520	TIMM13	Q9Y5L4	95 aa	Predicted RBP	4.53	□□□□□ -1.68
PTCD3-212	ENST00000477520	THSD7B	Q9C0I4	1608 aa		4.53	□□□□□ -1.68
PTCD3-212	ENST00000477520		A0A0G2JMZ2	1700 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	MGAM	O43451	1857 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	CEP350	Q5VT06	3117 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520		A0A0J9YYE9	177 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	GLYATL1P3	A0A0U1RQE8	302 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520		A0A1B0GWJ7	208 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520		A0A1W2PPL8	197 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	MFSD2B	A6NFX1	497 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	ASB14	A6NK59	587 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	TARM1	B6A8C7	271 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520		F8VP50	259 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	SGK494	L7N484	410 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	AIP	O00170	330 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	PSMD9	O00233	223 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	CDC7	O00311	574 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	E2F3	O00716	465 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	FPGT	O14772	594 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	DSCR3	O14972	297 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	KIAA0355	O15063	1070 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	ANKRD28	O15084	1053 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	PPM1D	O15297	605 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	MPZL2	O60487	215 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	FAM20B	O75063	409 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	CLN5	O75503	358 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	EED	O75530	441 aa	Known RBP	4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	CRTAP	O75718	401 aa	Predicted RBP	4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	TRUB2	O95900	331 aa	Known RBP	4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	IL1A	P01583	271 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	FABP1	P07148	127 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	C1S	P09871	688 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	GAA	P10253	952 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	SAG	P10523	405 aa	Predicted RBP	4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	LCP1	P13796	627 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	TYR	P14679	529 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	IL7R	P16871	459 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	SPI1	P17947	270 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	LBP	P18428	481 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	SDC4	P31431	198 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	CA5A	P35218	305 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	MTHFR	P42898	656 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	ASMT	P46597	345 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	GSK3B	P49841	420 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	NR0B1	P51843	470 aa	Known RBP	4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	PGD	P52209	483 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	NAGLU	P54802	743 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	BCAR1	P56945	870 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	KCNK10	P57789	538 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	CD81	P60033	236 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	PSMC6	P62333	389 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	RPL11	P62913	178 aa	Known RBP	4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	TFAM	Q00059	246 aa	Known RBP	4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	LIPE	Q05469	1076 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	CYP24A1	Q07973	514 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	SLAMF1	Q13291	335 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	CUL2	Q13617	745 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	BAAT	Q14032	418 aa	Predicted RBP	4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	GRB14	Q14449	540 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	EMC2	Q15006	297 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	TAF12	Q16514	161 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	KYAT1	Q16773	422 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	TATDN3	Q17R31	274 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	TIGD6	Q17RP2	521 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZACN	Q401N2	412 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	CDNF	Q49AH0	187 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	C2CD6	Q53TS8	623 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	DGKK	Q5KSL6	1271 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	OTUD3	Q5T2D3	398 aa	Predicted RBP	4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	B3GNTL1	Q67FW5	361 aa	Predicted RBP	4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	LAMTOR1	Q6IAA8	161 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	SLFN12L	Q6IEE8	588 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZNF425	Q6IV72	752 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	PYHIN1	Q6K0P9	492 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	ANKRD54	Q6NXT1	300 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	FUT10	Q6P4F1	479 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	C5orf46	Q6UWT4	87 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	CFAP77	Q6ZQR2	320 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520		Q6ZSN1	163 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	FAM183BP	Q6ZVS7	135 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	IKBIP	Q70UQ0	350 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	LARP4	Q71RC2	724 aa	Known RBP eCLIP	4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	UTS2B	Q765I0	119 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	LRRC8D	Q7L1W4	858 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	OTOP1	Q7RTM1	612 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	GPR142	Q7Z601	462 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	SNX20	Q7Z614	316 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	NECAB2	Q7Z6G3	386 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	TMEM135	Q86UB9	458 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZBTB46	Q86UZ6	589 aa		4.52	□□□□□ -1.69
PTCD3-212	ENST00000477520	LDLRAD3	Q86YD5	345 aa		4.52	□□□□□ -1.69

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