RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 QPCTLQ9NXS2 382 aa13.38□□□□□ -0.27
CSNK2B-207ENST00000475875 MYOTQ9UBF9 498 aa13.38□□□□□ -0.27
CSNK2B-207ENST00000475875 ZNF223Q9UK11 482 aaPredicted RBP13.38□□□□□ -0.27
CSNK2B-207ENST00000475875 R3HDM2Q9Y2K5 976 aaKnown RBP13.38□□□□□ -0.27
CSNK2B-207ENST00000475875 CAPN6Q9Y6Q1 641 aa13.38□□□□□ -0.27
CSNK2B-207ENST00000475875 ABCA1O95477 2261 aa13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 ZNF860A6NHJ4 632 aa13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 EEF1E1-BLOC1S5C9J1V9 151 aa13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 PSMD3O43242 534 aa13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 EEF1E1O43324 174 aaKnown RBP13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 CHST10O43529 356 aa13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 TMCC2O75069 709 aa13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 SOX30O94993 753 aa13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 RBP3P10745 1247 aa13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 GPR143P51810 404 aa13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 PRAMEP78395 509 aa13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 CHRFAM7AQ494W8 412 aa13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 TSTD2Q5T7W7 516 aa13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 THEMIS2Q5TEJ8 643 aa13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 CCDC181Q5TID7 509 aa13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 NSUN5P2Q63ZY6 315 aa13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 MPP5Q8N3R9 675 aa13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 PPHLN1Q8NEY8 458 aaKnown RBP13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 ACTL9Q8TC94 416 aa13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 CAPZA3Q96KX2 299 aa13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 CCDC138Q96M89 665 aa13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 RASL10BQ96S79 203 aa13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 NDRG3Q9UGV2 375 aa13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 VPS9D1Q9Y2B5 631 aa13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 SCN3AQ9NY46 2000 aa13.37□□□□□ -0.27
CSNK2B-207ENST00000475875 G3V3Y1 287 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 MYO1DO94832 1006 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 GAS8O95995 478 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 P04436 131 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 TP53P04637 393 aaPredicted RBP13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 FAM157CP0CG43 387 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 MAOAP21397 527 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 CTNNA1P35221 906 aaKnown RBP13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 SOX3P41225 446 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 GNG11P61952 73 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 BTG2P78543 158 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 P3H1Q32P28 736 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 XKR6Q5GH73 641 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 CAPN13Q6MZZ7 669 aaPredicted RBP13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 DARS2Q6PI48 645 aaKnown RBP13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 ABHD13Q7L211 337 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 SLC26A11Q86WA9 606 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 LRRC56Q8IYG6 542 aaPredicted RBP13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 PM20D2Q8IYS1 436 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 PPFIBP2Q8ND30 876 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 NEIL3Q8TAT5 605 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 KIAA1191Q96A73 305 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 RBM24Q9BX46 236 aaKnown RBP13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 AMBRA1Q9C0C7 1298 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 PCBD2Q9H0N5 130 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 EPB41L4BQ9H329 900 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 ZNF703Q9H7S9 590 aaPredicted RBP13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 CATSPERZQ9NTU4 200 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 TUBA8Q9NY65 449 aaPredicted RBP13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 SLC2A6Q9UGQ3 507 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 EFR3BQ9Y2G0 817 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 ZKSCAN5Q9Y2L8 839 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 JRKLQ9Y4A0 524 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 MMACHCQ9Y4U1 282 aa13.36□□□□□ -0.27
CSNK2B-207ENST00000475875 SYNDIG1LA6NDD5 238 aa13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 CD8B2A6NJW9 211 aa13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 A8MUA0 341 aa13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 ALOX12P18054 663 aa13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 CHRM3P20309 590 aa13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 GRK3P35626 688 aa13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 ADARP55265 1226 aaKnown RBP13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 EIF3EP60228 445 aaKnown RBP13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 COPS2P61201 443 aa13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 RUNX1T1Q06455 604 aa13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 TBL3Q12788 808 aaKnown RBP13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 CDH17Q12864 832 aa13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 CAPRIN1Q14444 709 aaKnown RBP13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 KRTAP24-1Q3LI83 254 aa13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 KRT35Q92764 455 aa13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 NCLNQ969V3 563 aa13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 HES6Q96HZ4 224 aa13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 SCYL1Q96KG9 808 aa13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 UBTD1Q9HAC8 227 aa13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 NECTIN3Q9NQS3 549 aa13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 PIH1D1Q9NWS0 290 aaKnown RBP13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 ZFATQ9P243 1243 aa13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 PACSIN2Q9UNF0 486 aaPredicted RBP13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 TESMINQ9Y4I5 508 aa13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 ATG4BQ9Y4P1 393 aa13.35□□□□□ -0.27
CSNK2B-207ENST00000475875 MBD3L3A6NE82 208 aaPredicted RBP13.34□□□□□ -0.27
CSNK2B-207ENST00000475875 H3BMM5 538 aa13.34□□□□□ -0.27
CSNK2B-207ENST00000475875 PSMD12O00232 456 aaPredicted RBP13.34□□□□□ -0.27
CSNK2B-207ENST00000475875 CD5LO43866 347 aa13.34□□□□□ -0.27
CSNK2B-207ENST00000475875 AVILO75366 819 aa13.34□□□□□ -0.27
CSNK2B-207ENST00000475875 ERN1O75460 977 aaKnown RBP13.34□□□□□ -0.27
CSNK2B-207ENST00000475875 RNH1P13489 461 aaKnown RBP13.34□□□□□ -0.27
CSNK2B-207ENST00000475875 ADRA1DP25100 572 aa13.34□□□□□ -0.27
CSNK2B-207ENST00000475875 DEKP35659 375 aaKnown RBP13.34□□□□□ -0.27
CSNK2B-207ENST00000475875 COILP38432 576 aaPredicted RBP13.34□□□□□ -0.27
CSNK2B-207ENST00000475875 DNASE1L1P49184 302 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms