RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 FAM214AQ32MH5 1076 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 DEFB134Q4QY38 66 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 TOR1AIP1Q5JTV8 583 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 CFAP157Q5JU67 520 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 HHATQ5VTY9 493 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 C1QL3Q5VWW1 255 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 KHDRBS2Q5VWX1 349 aaKnown RBP6.61□□□□□ -1.35
LIMD1-204ENST00000474665 KANK2Q63ZY3 851 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 MRPL14Q6P1L8 145 aaKnown RBP6.61□□□□□ -1.35
LIMD1-204ENST00000474665 CUZD1Q86UP6 607 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 LAPTM4BQ86VI4 370 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 CACNA2D3Q8IZS8 1091 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 NLGN4XQ8N0W4 816 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 ESX1Q8N693 406 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 AMER2Q8N7J2 671 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 TTC29Q8NA56 475 aaPredicted RBP6.61□□□□□ -1.35
LIMD1-204ENST00000474665 TRPV3Q8NET8 790 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 NLGN4YQ8NFZ3 816 aaPredicted RBP6.61□□□□□ -1.35
LIMD1-204ENST00000474665 TTLQ8NG68 377 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 OR2L5Q8NG80 312 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 METTL6Q8TCB7 284 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 PROKR1Q8TCW9 393 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 SSC4DQ8WTU2 575 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 N4BP2L2Q92802 583 aaPredicted RBP6.61□□□□□ -1.35
LIMD1-204ENST00000474665 MR1Q95460 341 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 UBE2E3Q969T4 207 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 ATP6V1E2Q96A05 226 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 CLIP3Q96DZ5 547 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 C11orf24Q96F05 449 aaPredicted RBP6.61□□□□□ -1.35
LIMD1-204ENST00000474665 SPSB2Q99619 263 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 TRMOQ9BU70 441 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 SLC29A3Q9BZD2 475 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 ACPTQ9BZG2 426 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 IRAK4Q9NWZ3 460 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 KCMF1Q9P0J7 381 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 ZDHHC2Q9UIJ5 367 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 HAO1Q9UJM8 370 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 MID2Q9UJV3 735 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 CROTQ9UKG9 612 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 NAALAD2Q9Y3Q0 740 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 CLDN16Q9Y5I7 305 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 DNAJC15Q9Y5T4 150 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 MRPS18BQ9Y676 258 aaKnown RBP6.61□□□□□ -1.35
LIMD1-204ENST00000474665 CELSR2Q9HCU4 2923 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 SVILO95425 2214 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 SERTM1A2A2V5 107 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 WIPF3A6NGB9 483 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 ANKDD1BA6NHY2 528 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 FAM227AF5H4B4 570 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 AZIN1O14977 448 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 ERI3O43414 337 aaKnown RBP6.6□□□□□ -1.35
LIMD1-204ENST00000474665 ATP8B1O43520 1251 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 CHST10O43529 356 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 TMPRSS11DO60235 418 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 SCELO95171 688 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 NSA2O95478 260 aaKnown RBP6.6□□□□□ -1.35
LIMD1-204ENST00000474665 UMODP07911 640 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 HBQ1P09105 142 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 FURINP09958 794 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 SLC35G6P0C7Q6 338 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 TCN2P20062 427 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 NR1D1P20393 614 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 ATP5A1P25705 553 aaKnown RBP6.6□□□□□ -1.35
LIMD1-204ENST00000474665 CERS1P27544 350 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 UQCRFS1P47985 274 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 HNRNPFP52597 415 aaKnown RBP6.6□□□□□ -1.35
LIMD1-204ENST00000474665 PLA2G16P53816 162 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 ABCE1P61221 599 aaKnown RBP6.6□□□□□ -1.35
LIMD1-204ENST00000474665 NAA20P61599 178 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 RPS18P62269 152 aaKnown RBP6.6□□□□□ -1.35
LIMD1-204ENST00000474665 PPP2R2AP63151 447 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 RAE1P78406 368 aaKnown RBP6.6□□□□□ -1.35
LIMD1-204ENST00000474665 BTN3A2P78410 334 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 HMGCS1Q01581 520 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 OCRLQ01968 901 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 RGS1Q08116 209 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 DNASE1L3Q13609 305 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 CUL3Q13618 768 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 HERC3Q15034 1050 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 NCF4Q15080 339 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 NKG7Q16617 165 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 HIST2H2ACQ16777 129 aaPredicted RBP6.6□□□□□ -1.35
LIMD1-204ENST00000474665 VWA2Q5GFL6 755 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 HIST2H2AA3Q6FI13 130 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 PRMT9Q6P2P2 845 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 CYB5D1Q6P9G0 228 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 RIPOR1Q6ZS17 1223 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 Q6ZSR9 355 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 OVCH1Q7RTY7 1134 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 TRIM46Q7Z4K8 759 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 ZC3H7AQ8IWR0 971 aaKnown RBP6.6□□□□□ -1.35
LIMD1-204ENST00000474665 TBC1D19Q8N5T2 526 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 ZNF781Q8N8C0 355 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 ENDOVQ8N8Q3 282 aaKnown RBP6.6□□□□□ -1.35
LIMD1-204ENST00000474665 TMEM52Q8NDY8 209 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 OR2T11Q8NH01 316 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 CCT6BQ92526 530 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 ZNF75CPQ92670 426 aaPredicted RBP6.6□□□□□ -1.35
LIMD1-204ENST00000474665 UCN3Q969E3 161 aa6.6□□□□□ -1.35
LIMD1-204ENST00000474665 GAL3ST3Q96A11 431 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms