RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 GRID1Q9ULK0 1009 aa18.98■□□□□ 0.63
APP-215ENST00000474136 NKX2-6A6NCS4 301 aa18.97■□□□□ 0.63
APP-215ENST00000474136 COPEO14579 308 aa18.97■□□□□ 0.63
APP-215ENST00000474136 ERGP11308 486 aa18.97■□□□□ 0.63
APP-215ENST00000474136 DNAJA1P31689 397 aaKnown RBP18.97■□□□□ 0.63
APP-215ENST00000474136 PTGER1P34995 402 aa18.97■□□□□ 0.63
APP-215ENST00000474136 CDKN2DP55273 166 aa18.97■□□□□ 0.63
APP-215ENST00000474136 FAM53BQ14153 422 aa18.97■□□□□ 0.63
APP-215ENST00000474136 FAM83EQ2M2I3 478 aa18.97■□□□□ 0.63
APP-215ENST00000474136 TSNAXIP1Q2TAA8 658 aa18.97■□□□□ 0.63
APP-215ENST00000474136 ZNF468Q5VIY5 522 aaPredicted RBP18.97■□□□□ 0.63
APP-215ENST00000474136 SLC25A25Q6KCM7 469 aa18.97■□□□□ 0.63
APP-215ENST00000474136 OR9A1PQ8NGU1 263 aa18.97■□□□□ 0.63
APP-215ENST00000474136 SMPDL3AQ92484 453 aa18.97■□□□□ 0.63
APP-215ENST00000474136 GPR21Q99679 349 aa18.97■□□□□ 0.63
APP-215ENST00000474136 OLFM1Q99784 485 aa18.97■□□□□ 0.63
APP-215ENST00000474136 UCK2Q9BZX2 261 aa18.97■□□□□ 0.63
APP-215ENST00000474136 VPS11Q9H270 941 aa18.97■□□□□ 0.63
APP-215ENST00000474136 CAB39LQ9H9S4 337 aa18.97■□□□□ 0.63
APP-215ENST00000474136 C19orf25Q9UFG5 118 aaPredicted RBP18.97■□□□□ 0.63
APP-215ENST00000474136 HRH3Q9Y5N1 445 aa18.97■□□□□ 0.63
APP-215ENST00000474136 ACANP16112 2415 aa18.96■□□□□ 0.63
APP-215ENST00000474136 ARHGEF33A8MVX0 844 aa18.96■□□□□ 0.63
APP-215ENST00000474136 HAT1O14929 419 aa18.96■□□□□ 0.63
APP-215ENST00000474136 GLRA3O75311 464 aa18.96■□□□□ 0.63
APP-215ENST00000474136 NIPSNAP2O75323 286 aa18.96■□□□□ 0.63
APP-215ENST00000474136 F7P08709 466 aaPredicted RBP18.96■□□□□ 0.63
APP-215ENST00000474136 SLC35E2BP0CK96 405 aa18.96■□□□□ 0.63
APP-215ENST00000474136 ZNF24P17028 368 aa18.96■□□□□ 0.63
APP-215ENST00000474136 CRHR1P34998 444 aa18.96■□□□□ 0.63
APP-215ENST00000474136 AVPR1BP47901 424 aa18.96■□□□□ 0.63
APP-215ENST00000474136 CLCN7P51798 805 aa18.96■□□□□ 0.63
APP-215ENST00000474136 IST1P53990 364 aa18.96■□□□□ 0.63
APP-215ENST00000474136 IL2P60568 153 aa18.96■□□□□ 0.63
APP-215ENST00000474136 MAPKAPK3Q16644 382 aa18.96■□□□□ 0.63
APP-215ENST00000474136 KLC3Q6P597 504 aa18.96■□□□□ 0.63
APP-215ENST00000474136 SH2D5Q6ZV89 423 aa18.96■□□□□ 0.63
APP-215ENST00000474136 CMC1Q7Z7K0 106 aa18.96■□□□□ 0.63
APP-215ENST00000474136 TMEM200AQ86VY9 491 aa18.96■□□□□ 0.63
APP-215ENST00000474136 CPSF7Q8N684 471 aaKnown RBP18.96■□□□□ 0.63
APP-215ENST00000474136 BANPQ8N9N5 519 aa18.96■□□□□ 0.63
APP-215ENST00000474136 FAM98AQ8NCA5 519 aaKnown RBP18.96■□□□□ 0.63
APP-215ENST00000474136 MAGEC3Q8TD91 643 aa18.96■□□□□ 0.63
APP-215ENST00000474136 PDLIM5Q96HC4 596 aaKnown RBP18.96■□□□□ 0.63
APP-215ENST00000474136 APOPT1Q96IL0 206 aa18.96■□□□□ 0.63
APP-215ENST00000474136 HCN3Q9P1Z3 774 aa18.96■□□□□ 0.63
APP-215ENST00000474136 INTS1Q8N201 2190 aaKnown RBP18.95■□□□□ 0.62
APP-215ENST00000474136 FAM90A27PA6NNH2 459 aa18.95■□□□□ 0.62
APP-215ENST00000474136 ENO3P13929 434 aaPredicted RBP18.95■□□□□ 0.62
APP-215ENST00000474136 ZNF37AP17032 561 aaPredicted RBP18.95■□□□□ 0.62
APP-215ENST00000474136 XCR1P46094 333 aa18.95■□□□□ 0.62
APP-215ENST00000474136 PRDX1Q06830 199 aaKnown RBP18.95■□□□□ 0.62
APP-215ENST00000474136 TFF3Q07654 80 aa18.95■□□□□ 0.62
APP-215ENST00000474136 ICE2Q659A1 982 aa18.95■□□□□ 0.62
APP-215ENST00000474136 PPFIBP2Q8ND30 876 aa18.95■□□□□ 0.62
APP-215ENST00000474136 OR51Q1Q8NH59 317 aa18.95■□□□□ 0.62
APP-215ENST00000474136 M1APQ8TC57 530 aa18.95■□□□□ 0.62
APP-215ENST00000474136 ZBTB9Q96C00 473 aa18.95■□□□□ 0.62
APP-215ENST00000474136 FAM136AQ96C01 138 aa18.95■□□□□ 0.62
APP-215ENST00000474136 UBXN10Q96LJ8 280 aa18.95■□□□□ 0.62
APP-215ENST00000474136 CNOT10Q9H9A5 744 aaKnown RBP18.95■□□□□ 0.62
APP-215ENST00000474136 NMRAL1Q9HBL8 299 aa18.95■□□□□ 0.62
APP-215ENST00000474136 MMP25Q9NPA2 562 aa18.95■□□□□ 0.62
APP-215ENST00000474136 ABCF3Q9NUQ8 709 aa18.95■□□□□ 0.62
APP-215ENST00000474136 LRFN1Q9P244 771 aa18.95■□□□□ 0.62
APP-215ENST00000474136 MED16Q9Y2X0 877 aa18.95■□□□□ 0.62
APP-215ENST00000474136 GOLGA8RI6L899 631 aa18.94■□□□□ 0.62
APP-215ENST00000474136 TM9SF1O15321 606 aa18.94■□□□□ 0.62
APP-215ENST00000474136 PHGDHO43175 533 aaKnown RBP18.94■□□□□ 0.62
APP-215ENST00000474136 KLHL2O95198 593 aa18.94■□□□□ 0.62
APP-215ENST00000474136 ZWINTO95229 277 aa18.94■□□□□ 0.62
APP-215ENST00000474136 MATN4O95460 622 aa18.94■□□□□ 0.62
APP-215ENST00000474136 LTA4HP09960 611 aaKnown RBP18.94■□□□□ 0.62
APP-215ENST00000474136 EZRP15311 586 aaKnown RBP18.94■□□□□ 0.62
APP-215ENST00000474136 ATP6V0D1P61421 351 aa18.94■□□□□ 0.62
APP-215ENST00000474136 TIAL1Q01085 375 aaKnown RBP eCLIP18.94■□□□□ 0.62
APP-215ENST00000474136 EXT1Q16394 746 aa18.94■□□□□ 0.62
APP-215ENST00000474136 NDUFA9Q16795 377 aa18.94■□□□□ 0.62
APP-215ENST00000474136 PAPD4Q6PIY7 484 aaKnown RBP18.94■□□□□ 0.62
APP-215ENST00000474136 ADCK2Q7Z695 626 aa18.94■□□□□ 0.62
APP-215ENST00000474136 CD163Q86VB7 1156 aa18.94■□□□□ 0.62
APP-215ENST00000474136 C4orf33Q8N1A6 199 aa18.94■□□□□ 0.62
APP-215ENST00000474136 CD200R1Q8TD46 325 aa18.94■□□□□ 0.62
APP-215ENST00000474136 MACROD1Q9BQ69 325 aa18.94■□□□□ 0.62
APP-215ENST00000474136 ZNF559Q9BR84 538 aa18.94■□□□□ 0.62
APP-215ENST00000474136 CDCP1Q9H5V8 836 aa18.94■□□□□ 0.62
APP-215ENST00000474136 KCNK9Q9NPC2 374 aa18.94■□□□□ 0.62
APP-215ENST00000474136 A0A1B0GTH9 108 aa18.93■□□□□ 0.62
APP-215ENST00000474136 H0YIG0 161 aa18.93■□□□□ 0.62
APP-215ENST00000474136 TXNDC9O14530 226 aa18.93■□□□□ 0.62
APP-215ENST00000474136 SLC25A12O75746 678 aa18.93■□□□□ 0.62
APP-215ENST00000474136 WISP3O95389 354 aaPredicted RBP18.93■□□□□ 0.62
APP-215ENST00000474136 TPOP07202 933 aa18.93■□□□□ 0.62
APP-215ENST00000474136 CCDC166P0CW27 439 aa18.93■□□□□ 0.62
APP-215ENST00000474136 IL1RNP18510 177 aa18.93■□□□□ 0.62
APP-215ENST00000474136 PPP2R2AP63151 447 aa18.93■□□□□ 0.62
APP-215ENST00000474136 ACAP2Q15057 778 aa18.93■□□□□ 0.62
APP-215ENST00000474136 CCDC153Q494R4 210 aa18.93■□□□□ 0.62
APP-215ENST00000474136 SFT2D3Q587I9 215 aa18.93■□□□□ 0.62
APP-215ENST00000474136 PAQR3Q6TCH7 311 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms