RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 TSFMP43897 325 aaKnown RBP11.72□□□□□ -0.53
DDX56-209ENST00000473924 RHDQ02161 417 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 ATP1A4Q13733 1029 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 RCN2Q14257 317 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 TCHHL1Q5QJ38 904 aaPredicted RBP11.72□□□□□ -0.53
DDX56-209ENST00000473924 HHATQ5VTY9 493 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 FAAH2Q6GMR7 532 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 BORAQ6PGQ7 559 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 UBE3DQ7Z6J8 389 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 MRGPREQ86SM8 312 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 TMEM151BQ8IW70 566 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 CA13Q8N1Q1 262 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 ACOT4Q8N9L9 421 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 APOBEC4Q8WW27 367 aaKnown RBP11.72□□□□□ -0.53
DDX56-209ENST00000473924 METTL21AQ8WXB1 218 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 EXTL1Q92935 676 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 NACC2Q96BF6 587 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 PKNOX2Q96KN3 472 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 HBEGFQ99075 208 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 ACBD3Q9H3P7 528 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 BRF2Q9HAW0 419 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 EML4Q9HC35 981 aaKnown RBP11.72□□□□□ -0.53
DDX56-209ENST00000473924 MLXIPLQ9NP71 852 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 PRDM7Q9NQW5 492 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 NKIRAS1Q9NYS0 192 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 AHSPQ9NZD4 102 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 PPT2Q9UMR5 302 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 SLC12A4Q9UP95 1085 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 TIMM22Q9Y584 194 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 SPACA6W5XKT8 324 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 ZZEF1O43149 2961 aa11.72□□□□□ -0.53
DDX56-209ENST00000473924 ARGFXA6NJG6 315 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 BIRC5O15392 142 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 SEMA3DO95025 777 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 ETHE1O95571 254 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 HSD3B1P14060 373 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 ATP5A1P25705 553 aaKnown RBP11.71□□□□□ -0.53
DDX56-209ENST00000473924 HSD3B2P26439 372 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 SERPINB5P36952 375 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 ARFIP1P53367 373 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 RRADP55042 308 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 RAB38P57729 211 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 ZNF33BQ06732 778 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 CSTF3Q12996 717 aaKnown RBP11.71□□□□□ -0.53
DDX56-209ENST00000473924 SLAMF1Q13291 335 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 RUNX2Q13950 521 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 MPP2Q14168 576 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 TBR1Q16650 682 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 TUBB8Q3ZCM7 444 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 CYP20A1Q6UW02 462 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 ZNF793Q6ZN11 406 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 PAGE2Q7Z2X7 111 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 PPP1R32Q7Z5V6 425 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 CUZD1Q86UP6 607 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 NUDT13Q86X67 352 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 SHISA5Q8N114 240 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 MGARPQ8TDB4 240 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 ADAMTS18Q8TE60 1221 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 ARL8AQ96BM9 186 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 ATP6V1G3Q96LB4 118 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 FER1L6-AS2Q96M78 137 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 SORBS1Q9BX66 1292 aaKnown RBP11.71□□□□□ -0.53
DDX56-209ENST00000473924 MRPL1Q9BYD6 325 aaKnown RBP11.71□□□□□ -0.53
DDX56-209ENST00000473924 VN1R1Q9GZP7 353 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 P4HTMQ9NXG6 502 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 FBXW2Q9UKT8 454 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 DAPP1Q9UN19 280 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 MRPS33Q9Y291 106 aaKnown RBP11.71□□□□□ -0.53
DDX56-209ENST00000473924 FIS1Q9Y3D6 152 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 HS3ST3B1Q9Y662 390 aa11.71□□□□□ -0.53
DDX56-209ENST00000473924 DSPP15924 2871 aaKnown RBP11.71□□□□□ -0.54
DDX56-209ENST00000473924 LAMA5O15230 3695 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 ARHGAP10A1A4S6 786 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 OR2W5A6NFC9 320 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 FAM227AF5H4B4 570 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 CLDN4O14493 209 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 PCDH17O14917 1159 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 AZIN1O14977 448 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 PRMT3O60678 531 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 ALOX12BO75342 701 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 CHEK2O96017 543 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 CYC1P08574 325 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 C8orf89P0DMQ9 161 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 UROSP10746 265 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 ACPPP15309 386 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 SERPINB3P29508 390 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 HTR6P50406 440 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 FOXA1P55317 472 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 LIM2P55344 173 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 ABRAXAS2Q15018 415 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 NSDHLQ15738 373 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 CHI3L2Q15782 390 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 IMPG1Q17R60 797 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 ARL13AQ5H913 290 aaPredicted RBP11.7□□□□□ -0.54
DDX56-209ENST00000473924 FAM219BQ5XKK7 198 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 CLEC6AQ6EIG7 209 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 SCIMPQ6UWF3 145 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 MED25Q71SY5 747 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 EFCAB3Q8N7B9 438 aa11.7□□□□□ -0.54
DDX56-209ENST00000473924 GBP7Q8N8V2 638 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms