RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 LINGO4Q6UY18 593 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 NRARPQ7Z6K4 114 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 DDX53Q86TM3 631 aaKnown RBP5.87□□□□□ -1.47
HERC4-209ENST00000473533 ATCAYQ86WG3 371 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 CLECL1Q8IZS7 167 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 RDH10Q8IZV5 341 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 CELF2-AS1Q8N7Q2 184 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 AQP11Q8NBQ7 271 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 PSD4Q8NDX1 1056 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 OR2AP1Q8NGE2 309 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 SLC7A6Q92536 515 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 TMEM159Q96B96 161 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 ZNF607Q96SK3 696 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 KCNS3Q9BQ31 491 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 RHNO1Q9BSD3 238 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 SPATA5L1Q9BVQ7 753 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 ARHGAP39Q9C0H5 1083 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 SRRQ9GZT4 340 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 RNF121Q9H920 327 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 MYNNQ9NPC7 610 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 FZD3Q9NPG1 666 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 PTTG3PQ9NZH4 202 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 FTSJ1Q9UET6 329 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 FRMPD3Q5JV73 1810 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 CHST10O43529 356 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 SNAPC5O75971 98 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 RAB36O95755 333 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 TSPAN19P0C672 248 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 GAAP10253 952 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 CYBAP13498 195 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 HLA-EP13747 358 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 UQCRC2P22695 453 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 EPHA2P29317 976 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 CCR7P32248 378 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 IFNA8P32881 189 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 IFNGR2P38484 337 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 CSKP41240 450 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 NUDT6P53370 316 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 HEPACAMQ14CZ8 416 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 LARS2Q15031 903 aaKnown RBP5.87□□□□□ -1.47
HERC4-209ENST00000473533 DUSP6Q16828 381 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 MPPE1Q53F39 396 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 SLC25A30Q5SVS4 291 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 DCST1Q5T197 706 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 ATXN7L2Q5T6C5 722 aaPredicted RBP5.87□□□□□ -1.47
HERC4-209ENST00000473533 REEP3Q6NUK4 255 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 ZNF551Q7Z340 670 aaPredicted RBP5.87□□□□□ -1.47
HERC4-209ENST00000473533 RAVER1Q8IY67 606 aaKnown RBP5.87□□□□□ -1.47
HERC4-209ENST00000473533 SLC34A3Q8N130 599 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 C10orf111Q8N326 155 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 NUDT8Q8WV74 236 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 ELMO1Q92556 727 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 ZC3HAV1LQ96H79 300 aaKnown RBP5.87□□□□□ -1.47
HERC4-209ENST00000473533 EGLN2Q96KS0 407 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 QRFPRQ96P65 431 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 DPH2Q9BQC3 489 aaPredicted RBP5.87□□□□□ -1.47
HERC4-209ENST00000473533 SYT17Q9BSW7 474 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 CPEB1Q9BZB8 566 aaKnown RBP5.87□□□□□ -1.47
HERC4-209ENST00000473533 POLR2J2Q9GZM3 115 aaKnown RBP5.87□□□□□ -1.47
HERC4-209ENST00000473533 ROGDIQ9GZN7 287 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 ABCB8Q9NUT2 735 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 AASSQ9UDR5 926 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 EXOSC1Q9Y3B2 195 aaKnown RBP5.87□□□□□ -1.47
HERC4-209ENST00000473533 PCDHGB7Q9Y5F8 929 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 ACTL7AQ9Y615 435 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 GABRR3A8MPY1 467 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 H3BQ06 376 aaPredicted RBP5.86□□□□□ -1.47
HERC4-209ENST00000473533 AXIN1O15169 862 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 ORC5O43913 435 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 CD160O95971 181 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 IRF1P10914 325 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 ACADMP11310 421 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 ITPKAP23677 461 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 NUDT1P36639 197 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 LIMS1P48059 325 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 DCDC1P59894 354 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 DSTNP60981 165 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 CYP4F2P78329 520 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 PLD1Q13393 1074 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 GNA13Q14344 377 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 CARTPTQ16568 116 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 CDKN3Q16667 212 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 DUSP7Q16829 419 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 SLC8B1Q6J4K2 584 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 LAPTM4BQ86VI4 370 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 GATAD2AQ86YP4 633 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 NAGSQ8N159 534 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 TTC9BQ8N6N2 239 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 NANOGP1Q8N7R0 232 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 FBXO15Q8NCQ5 510 aaPredicted RBP5.86□□□□□ -1.47
HERC4-209ENST00000473533 JPH3Q8WXH2 748 aaPredicted RBP5.86□□□□□ -1.47
HERC4-209ENST00000473533 SLC25A46Q96AG3 418 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 AP2M1Q96CW1 435 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 CHFRQ96EP1 664 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 ST6GAL2Q96JF0 529 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 ZFYVE19Q96K21 471 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 MSLNLQ96KJ4 702 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 OPALINQ96PE5 141 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 MYOCQ99972 504 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 RNF38Q9H0F5 515 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms