RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 RPS13P62277 151 aaKnown RBP12.37□□□□□ -0.43
TPM3-216ENST00000473036 BTN3A2P78410 334 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 CLCQ05315 142 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 Q0VFX4 171 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 MPP2Q14168 576 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 PCLAFQ15004 111 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 ZRSR2Q15696 482 aaKnown RBP12.37□□□□□ -0.43
TPM3-216ENST00000473036 PAGE2BQ5JRK9 111 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 TMEM52Q8NDY8 209 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 ARMC2Q8NEN0 867 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 TTLQ8NG68 377 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 OR2L5Q8NG80 312 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 THAP4Q8WY91 577 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 CCT6BQ92526 530 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 MTFMTQ96DP5 389 aaKnown RBP12.37□□□□□ -0.43
TPM3-216ENST00000473036 PEX11GQ96HA9 241 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 PSMG3-AS1Q96PY0 264 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 MTERF1Q99551 399 aaKnown RBP12.37□□□□□ -0.43
TPM3-216ENST00000473036 CRB3Q9BUF7 120 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 VN1R1Q9GZP7 353 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 REXO4Q9GZR2 422 aaKnown RBP12.37□□□□□ -0.43
TPM3-216ENST00000473036 OR51B5Q9H339 312 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 DMRT3Q9NQL9 472 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 FARSBQ9NSD9 589 aaKnown RBP12.37□□□□□ -0.43
TPM3-216ENST00000473036 OXSMQ9NWU1 459 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 P4HTMQ9NXG6 502 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 C3orf18Q9UK00 162 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 MAN2B2Q9Y2E5 1009 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 CLDN16Q9Y5I7 305 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 USP9XQ93008 2570 aaPredicted RBP12.37□□□□□ -0.43
TPM3-216ENST00000473036 IDSB3KWA1 339 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 TGFBR3LH3BV60 316 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 CDC123O75794 336 aaPredicted RBP12.36□□□□□ -0.43
TPM3-216ENST00000473036 SUPT7LO94864 414 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 OR4F21O95013 312 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 CERS1P27544 350 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 GSTM2P28161 218 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 PPP2R2AP63151 447 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 RHAGQ02094 409 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 OCA2Q04671 838 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 DDX39BQ13838 428 aaKnown RBP12.36□□□□□ -0.43
TPM3-216ENST00000473036 HIST2H2ACQ16777 129 aaPredicted RBP12.36□□□□□ -0.43
TPM3-216ENST00000473036 GGTA1PQ4G0N0 100 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 DEPDC1Q5TB30 811 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 CES4AQ5XG92 561 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 HIST2H2AA3Q6FI13 130 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 FAAH2Q6GMR7 532 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 TMEM205Q6UW68 189 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 LANCL3Q6ZV70 420 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 ABHD13Q7L211 337 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 MYLK4Q86YV6 388 aaPredicted RBP12.36□□□□□ -0.43
TPM3-216ENST00000473036 C10orf107Q8IVU9 208 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 APLFQ8IW19 511 aaPredicted RBP12.36□□□□□ -0.43
TPM3-216ENST00000473036 OR11G2Q8NGC1 345 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 TCP10LQ8TDR4 215 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 GAL3ST3Q96A11 431 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 ARL8AQ96BM9 186 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 FAM111AQ96PZ2 611 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 KCNA7Q96RP8 456 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 MECRQ9BV79 373 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 NXT1Q9UKK6 140 aaKnown RBP12.36□□□□□ -0.43
TPM3-216ENST00000473036 MKL2Q9ULH7 1088 aa12.36□□□□□ -0.43
TPM3-216ENST00000473036 PLPP1O14494 284 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 BIRC5O15392 142 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 SNUPNO95149 360 aaKnown RBP12.35□□□□□ -0.43
TPM3-216ENST00000473036 CELA2AP08217 269 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 CD63P08962 238 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 MYL2P10916 166 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 COX6A1P12074 109 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 CPA3P15088 417 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 NR1D1P20393 614 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 ARRB2P32121 409 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 PIK3CBP42338 1070 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 ETV4P43268 484 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 HTR6P50406 440 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 NAGLUP54802 743 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 EMP2P54851 167 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 FOXA1P55317 472 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 DNAJB13P59910 316 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 STXBP1P61764 594 aaKnown RBP12.35□□□□□ -0.43
TPM3-216ENST00000473036 BTG2P78543 158 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 RBBP7Q16576 425 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 KHDRBS2Q5VWX1 349 aaKnown RBP12.35□□□□□ -0.43
TPM3-216ENST00000473036 MILR1Q7Z6M3 343 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 RAB43Q86YS6 212 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 SLC22A9Q8IVM8 553 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 TRIM42Q8IWZ5 723 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 C9orf43Q8TAL5 461 aaPredicted RBP12.35□□□□□ -0.43
TPM3-216ENST00000473036 AGAP11Q8TF27 550 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 APOBEC4Q8WW27 367 aaKnown RBP12.35□□□□□ -0.43
TPM3-216ENST00000473036 TSLPQ969D9 159 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 UBE2E3Q969T4 207 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 ATP6V1E2Q96A05 226 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 ZNF382Q96SR6 550 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 CSF3RQ99062 836 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 WDR77Q9BQA1 342 aaPredicted RBP12.35□□□□□ -0.43
TPM3-216ENST00000473036 ING2Q9H160 280 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 SEMA3GQ9NS98 782 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 KCMF1Q9P0J7 381 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 FBXL4Q9UKA2 621 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms