RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 ZNF268Q14587 947 aaPredicted RBP2.46□□□□□ -2.02
XRN1-210ENST00000472697 CAVIN4Q5BKX8 364 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 ZNF793Q6ZN11 406 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 LCNL1Q6ZST4 164 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 ANKRD46Q86W74 232 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 PTOV1Q86YD1 416 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 TMC8Q8IU68 726 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 EGFL6Q8IUX8 553 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 UBQLNLQ8IYU4 475 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 LGI2Q8N0V4 545 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 BCORP1Q8N888 145 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 FAM47BQ8NA70 645 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 LEMD2Q8NC56 503 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 OIT3Q8WWZ8 545 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 TMEM45BQ96B21 275 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 NXPE2Q96DL1 559 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 RAB3CQ96E17 227 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 RTP3Q9BQQ7 232 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 KRTAP3-1Q9BYR8 98 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 SLC7A5P2Q9GIP4 190 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 LRMDAQ9H2I8 198 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 ADARB2Q9NS39 739 aaKnown RBP2.46□□□□□ -2.02
XRN1-210ENST00000472697 DDX28Q9NUL7 540 aaKnown RBP2.46□□□□□ -2.02
XRN1-210ENST00000472697 GTSE1Q9NYZ3 720 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 TRIM10Q9UDY6 481 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 CNOT11Q9UKZ1 510 aaKnown RBP2.46□□□□□ -2.02
XRN1-210ENST00000472697 AP4B1Q9Y6B7 739 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 V9GYY5 206 aaPredicted RBP2.46□□□□□ -2.02
XRN1-210ENST00000472697 UNC79Q9P2D8 2635 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 GON4LQ3T8J9 2241 aa2.46□□□□□ -2.02
XRN1-210ENST00000472697 ARFGEF2Q9Y6D5 1785 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 TRAV18A0A075B6X5 111 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 LINC01553A4QN01 128 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 BTBD17A6NE02 478 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 MEI4A8MW99 385 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 CSO75390 466 aaKnown RBP2.45□□□□□ -2.02
XRN1-210ENST00000472697 CPN1P15169 458 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 ELAVL4P26378 380 aaKnown RBP2.45□□□□□ -2.02
XRN1-210ENST00000472697 RDXP35241 583 aaKnown RBP2.45□□□□□ -2.02
XRN1-210ENST00000472697 PTGFRP43088 359 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 FMO5P49326 533 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 FNTAP49354 379 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 PITX1P78337 314 aaPredicted RBP2.45□□□□□ -2.02
XRN1-210ENST00000472697 EFTUD2Q15029 972 aaKnown RBP eCLIP2.45□□□□□ -2.021e-14■■■□□ 18.2
XRN1-210ENST00000472697 EXT1Q16394 746 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 ACKR1Q16570 336 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 MAPK6Q16659 721 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 SLC36A3Q495N2 470 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 GPR33Q49SQ1 333 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 AGKQ53H12 422 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 TAF3Q5VWG9 929 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 FRG2Q64ET8 278 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 KDM7AQ6ZMT4 941 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 Q6ZTK2 550 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 CNGA4Q8IV77 575 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 LCORLQ8N3X6 602 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 STKLD1Q8NE28 680 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 CD99L2Q8TCZ2 262 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 SLC9A6Q92581 669 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 EDAQ92838 391 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 TMIGD2Q96BF3 282 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 BDH2Q9BUT1 245 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 GLT8D2Q9H1C3 349 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 ANKRA2Q9H9E1 313 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 SEMA4GQ9NTN9 838 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 OCIAD1Q9NX40 245 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 PTTG3PQ9NZH4 202 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 RAI14Q9P0K7 980 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 PACSIN3Q9UKS6 424 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 KCNJ14Q9UNX9 436 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 ITM2BQ9Y287 266 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 OR1A2Q9Y585 309 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 PTGDR2Q9Y5Y4 395 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 ETV7Q9Y603 341 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 EP400Q96L91 3159 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 KIF7Q2M1P5 1343 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 UBR3Q6ZT12 1888 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 ADAMTSL1Q8N6G6 1762 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 TRBV2A0A0J9YWF9 115 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 MEX3AA1L020 520 aaKnown RBP2.45□□□□□ -2.02
XRN1-210ENST00000472697 POC1B-GALNT4F8VUJ3 575 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 LGALS8O00214 317 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 ABCD4O14678 606 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 OGTO15294 1046 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 RRP8O43159 456 aaKnown RBP2.45□□□□□ -2.02
XRN1-210ENST00000472697 AKR7A2O43488 359 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 ITM2AO43736 263 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 WDR1O75083 606 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 BBOX1O75936 387 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 HPRP00739 348 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 ASNSP08243 561 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 HLA-DOBP13765 273 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 EPCAMP16422 314 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 CCND2P30279 289 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 PDLIM4P50479 330 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 XIAPP98170 497 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 HSF2Q03933 536 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 ARHGAP1Q07960 439 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 NFATC2Q13469 925 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 KEAP1Q14145 624 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms