RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 CYC1P08574 325 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 CCDC166P0CW27 439 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 ACPPP15309 386 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 CD1DP15813 335 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 GMPRP36959 345 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 PWP1Q13610 501 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 RCN2Q14257 317 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 TGFBIQ15582 683 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 NADK2Q4G0N4 442 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 DNAL1Q4LDG9 190 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 CFAP157Q5JU67 520 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 CDKL4Q5MAI5 379 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 CATSPEREQ5SY80 951 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 ATG9BQ674R7 924 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 ZYG11AQ6WRX3 759 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 TREML1Q86YW5 311 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 ZC3H7AQ8IWR0 971 aaKnown RBP13.68□□□□□ -0.22
COL27A1-203ENST00000468565 PRSS58Q8IYP2 241 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 TCAIMQ8N3R3 496 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 OR9A4Q8NGU2 314 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 RHBDF1Q96CC6 855 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 SCYL1Q96KG9 808 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 UBXN10Q96LJ8 280 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 YIPF2Q9BWQ6 316 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 CLMPQ9H6B4 373 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 SLC22A14Q9Y267 594 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 C15orf41Q9Y2V0 281 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 SLC22A7Q9Y694 548 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 IDSB3KWA1 339 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 OR1F1O43749 312 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 SORBS2O94875 1100 aaKnown RBP13.68□□□□□ -0.22
COL27A1-203ENST00000468565 HPP00738 406 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 CRABP2P29373 138 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 AHRP35869 848 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 PGM1P36871 562 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 SLC6A12P48065 614 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 IDH3AP50213 366 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 EMP2P54851 167 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 SNRPNP63162 240 aaKnown RBP13.68□□□□□ -0.22
COL27A1-203ENST00000468565 REEP5Q00765 189 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 ASPHQ12797 758 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 RAPSNQ13702 412 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 COLEC12Q5KU26 742 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 NXPE4Q6UWF7 544 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 IGFL3Q6UXB1 125 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 LAPTM4BQ86VI4 370 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 RBMXL3Q8N7X1 1067 aaKnown RBP13.68□□□□□ -0.22
COL27A1-203ENST00000468565 MACROD1Q9BQ69 325 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 AIF1LQ9BQI0 150 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 ANKHQ9HCJ1 492 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 ACOT9Q9Y305 439 aa13.68□□□□□ -0.22
COL27A1-203ENST00000468565 SHANK1Q9Y566 2161 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 CPAMD8Q8IZJ3 1885 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 CNTRLQ7Z7A1 2325 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 MASP2O00187 686 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 FFAR3O14843 346 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 GPR42O15529 346 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 HEXBP07686 556 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 IL1RNP18510 177 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 ITGA3P26006 1051 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 HK2P52789 917 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 MAT1AQ00266 395 aaKnown RBP13.67□□□□□ -0.22
COL27A1-203ENST00000468565 MEF2AQ02078 507 aaPredicted RBP13.67□□□□□ -0.22
COL27A1-203ENST00000468565 SYT16Q17RD7 645 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 TSNAXIP1Q2TAA8 658 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 NIPAL1Q6NVV3 410 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 TMPRSS11BQ86T26 416 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 AFAP1L2Q8N4X5 818 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 KCT2Q8NC54 265 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 ZCCHC10Q8TBK6 192 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 NT5CQ8TCD5 201 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 TM9SF4Q92544 642 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 PNPLA2Q96AD5 504 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 ANKRD27Q96NW4 1050 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 SPNS1Q9H2V7 528 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 DCLRE1BQ9H816 532 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 OXSMQ9NWU1 459 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 MCM8Q9UJA3 840 aa13.67□□□□□ -0.22
COL27A1-203ENST00000468565 A0A087X1B8 175 aa13.66□□□□□ -0.22
COL27A1-203ENST00000468565 NDUFS4O43181 175 aa13.66□□□□□ -0.22
COL27A1-203ENST00000468565 BMP10O95393 424 aa13.66□□□□□ -0.22
COL27A1-203ENST00000468565 COX6A1P12074 109 aa13.66□□□□□ -0.22
COL27A1-203ENST00000468565 CXCR2P25025 360 aa13.66□□□□□ -0.22
COL27A1-203ENST00000468565 GGT5P36269 586 aa13.66□□□□□ -0.22
COL27A1-203ENST00000468565 CPA2P48052 419 aa13.66□□□□□ -0.22
COL27A1-203ENST00000468565 MXRA7P84157 204 aa13.66□□□□□ -0.22
COL27A1-203ENST00000468565 UBAP2LQ14157 1087 aaKnown RBP13.66□□□□□ -0.22
COL27A1-203ENST00000468565 HERC3Q15034 1050 aa13.66□□□□□ -0.22
COL27A1-203ENST00000468565 IRAK1BP1Q5VVH5 260 aa13.66□□□□□ -0.22
COL27A1-203ENST00000468565 LIPMQ5VYY2 423 aa13.66□□□□□ -0.22
COL27A1-203ENST00000468565 SULT1C3Q6IMI6 304 aa13.66□□□□□ -0.22
COL27A1-203ENST00000468565 JMJD6Q6NYC1 403 aaPredicted RBP13.66□□□□□ -0.22
COL27A1-203ENST00000468565 NDUFAF7Q7L592 441 aa13.66□□□□□ -0.22
COL27A1-203ENST00000468565 PRSS41Q7RTY9 318 aa13.66□□□□□ -0.22
COL27A1-203ENST00000468565 GPSM1Q86YR5 675 aa13.66□□□□□ -0.22
COL27A1-203ENST00000468565 SPATA6LQ8N4H0 392 aa13.66□□□□□ -0.22
COL27A1-203ENST00000468565 ZNF740Q8NDX6 193 aa13.66□□□□□ -0.22
COL27A1-203ENST00000468565 KIAA1191Q96A73 305 aa13.66□□□□□ -0.22
COL27A1-203ENST00000468565 MIB2Q96AX9 1013 aa13.66□□□□□ -0.22
COL27A1-203ENST00000468565 UNKQ9C0B0 810 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms