RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 PEX1O43933 1283 aa19.64■□□□□ 0.73
COL9A3-207ENST00000467819 ITGA10O75578 1167 aa19.64■□□□□ 0.73
COL9A3-207ENST00000467819 PIAS1O75925 651 aa19.64■□□□□ 0.73
COL9A3-207ENST00000467819 POU3F2P20265 443 aaPredicted RBP19.64■□□□□ 0.73
COL9A3-207ENST00000467819 RAB38P57729 211 aa19.64■□□□□ 0.73
COL9A3-207ENST00000467819 GPR85P60893 370 aa19.64■□□□□ 0.73
COL9A3-207ENST00000467819 SLC13A2Q13183 592 aa19.64■□□□□ 0.73
COL9A3-207ENST00000467819 ZNF295-AS1Q8N0V1 137 aa19.64■□□□□ 0.73
COL9A3-207ENST00000467819 PHF10Q8WUB8 498 aaKnown RBP19.64■□□□□ 0.73
COL9A3-207ENST00000467819 VMP1Q96GC9 406 aa19.64■□□□□ 0.73
COL9A3-207ENST00000467819 RUNDC3BQ96NL0 473 aa19.64■□□□□ 0.73
COL9A3-207ENST00000467819 DMRTA2Q96SC8 542 aa19.64■□□□□ 0.73
COL9A3-207ENST00000467819 VKORC1Q9BQB6 163 aa19.64■□□□□ 0.73
COL9A3-207ENST00000467819 CCDC77Q9BR77 488 aa19.64■□□□□ 0.73
COL9A3-207ENST00000467819 NPLQ9BXD5 320 aaPredicted RBP19.64■□□□□ 0.73
COL9A3-207ENST00000467819 RHOJQ9H4E5 214 aa19.64■□□□□ 0.73
COL9A3-207ENST00000467819 MOCS1Q9NZB8 636 aa19.64■□□□□ 0.73
COL9A3-207ENST00000467819 CELSR1Q9NYQ6 3014 aa19.63■□□□□ 0.73
COL9A3-207ENST00000467819 A0A1B0GTH9 108 aa19.63■□□□□ 0.73
COL9A3-207ENST00000467819 LRIT2A6NDA9 550 aa19.63■□□□□ 0.73
COL9A3-207ENST00000467819 CLDN4O14493 209 aa19.63■□□□□ 0.73
COL9A3-207ENST00000467819 B3GALT2O43825 422 aa19.63■□□□□ 0.73
COL9A3-207ENST00000467819 HS6ST1O60243 411 aa19.63■□□□□ 0.73
COL9A3-207ENST00000467819 TPOP07202 933 aa19.63■□□□□ 0.73
COL9A3-207ENST00000467819 PTGS2P35354 604 aa19.63■□□□□ 0.73
COL9A3-207ENST00000467819 PLA2G16P53816 162 aa19.63■□□□□ 0.73
COL9A3-207ENST00000467819 SLC12A2P55011 1212 aa19.63■□□□□ 0.73
COL9A3-207ENST00000467819 TERF2Q15554 542 aa19.63■□□□□ 0.73
COL9A3-207ENST00000467819 TGFBIQ15582 683 aa19.63■□□□□ 0.73
COL9A3-207ENST00000467819 FBXO48Q5FWF7 155 aa19.63■□□□□ 0.73
COL9A3-207ENST00000467819 MDGA2Q7Z553 956 aa19.63■□□□□ 0.73
COL9A3-207ENST00000467819 CLNKQ7Z7G1 428 aa19.63■□□□□ 0.73
COL9A3-207ENST00000467819 CD163Q86VB7 1156 aa19.63■□□□□ 0.73
COL9A3-207ENST00000467819 EID3Q8N140 333 aa19.63■□□□□ 0.73
COL9A3-207ENST00000467819 KRT78Q8N1N4 520 aa19.63■□□□□ 0.73
COL9A3-207ENST00000467819 SPATA6LQ8N4H0 392 aa19.63■□□□□ 0.73
COL9A3-207ENST00000467819 SREK1Q8WXA9 508 aaKnown RBP19.63■□□□□ 0.73
COL9A3-207ENST00000467819 SDCCAG3Q96C92 435 aa19.63■□□□□ 0.73
COL9A3-207ENST00000467819 KCNF1Q9H3M0 494 aa19.63■□□□□ 0.73
COL9A3-207ENST00000467819 WWOXQ9NZC7 414 aa19.63■□□□□ 0.73
COL9A3-207ENST00000467819 INTS1Q8N201 2190 aaKnown RBP19.63■□□□□ 0.73
COL9A3-207ENST00000467819 AKAP9Q99996 3911 aa19.62■□□□□ 0.73
COL9A3-207ENST00000467819 A0A088AWK7 358 aa19.62■□□□□ 0.73
COL9A3-207ENST00000467819 ANKDD1BA6NHY2 528 aa19.62■□□□□ 0.73
COL9A3-207ENST00000467819 EFCAB8A8MWE9 144 aa19.62■□□□□ 0.73
COL9A3-207ENST00000467819 TP73O15350 636 aa19.62■□□□□ 0.73
COL9A3-207ENST00000467819 PRKNO60260 465 aaPredicted RBP19.62■□□□□ 0.73
COL9A3-207ENST00000467819 ZNF10P21506 573 aaPredicted RBP19.62■□□□□ 0.73
COL9A3-207ENST00000467819 CERS1P27544 350 aa19.62■□□□□ 0.73
COL9A3-207ENST00000467819 SSR4P51571 173 aa19.62■□□□□ 0.73
COL9A3-207ENST00000467819 HSD17B7P56937 341 aa19.62■□□□□ 0.73
COL9A3-207ENST00000467819 ADNP2Q6IQ32 1131 aa19.62■□□□□ 0.73
COL9A3-207ENST00000467819 TRIM40Q6P9F5 258 aa19.62■□□□□ 0.73
COL9A3-207ENST00000467819 C16orf47Q6ZP98 133 aaPredicted RBP19.62■□□□□ 0.73
COL9A3-207ENST00000467819 CREG2Q8IUH2 290 aa19.62■□□□□ 0.73
COL9A3-207ENST00000467819 ZBED8Q8IZ13 594 aa19.62■□□□□ 0.73
COL9A3-207ENST00000467819 QRFPRQ96P65 431 aa19.62■□□□□ 0.73
COL9A3-207ENST00000467819 TMEM79Q9BSE2 394 aa19.62■□□□□ 0.73
COL9A3-207ENST00000467819 CAB39LQ9H9S4 337 aa19.62■□□□□ 0.73
COL9A3-207ENST00000467819 LIN28AQ9H9Z2 209 aaKnown RBP19.62■□□□□ 0.73
COL9A3-207ENST00000467819 POPDC3Q9HBV1 291 aa19.62■□□□□ 0.73
COL9A3-207ENST00000467819 ADAP2Q9NPF8 381 aa19.62■□□□□ 0.73
COL9A3-207ENST00000467819 SMYD2Q9NRG4 433 aa19.62■□□□□ 0.73
COL9A3-207ENST00000467819 NSMCE4AQ9NXX6 385 aa19.62■□□□□ 0.73
COL9A3-207ENST00000467819 ERVK-11Q9UQG0 969 aa19.62■□□□□ 0.73
COL9A3-207ENST00000467819 MRPS33Q9Y291 106 aaKnown RBP19.62■□□□□ 0.73
COL9A3-207ENST00000467819 CLDN16Q9Y5I7 305 aa19.62■□□□□ 0.73
COL9A3-207ENST00000467819 HCFC1P51610 2035 aa19.62■□□□□ 0.73
COL9A3-207ENST00000467819 PHF3Q92576 2039 aaKnown RBP19.62■□□□□ 0.73
COL9A3-207ENST00000467819 MYOCOSA0A1B0GUC4 107 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 USP27XA6NNY8 438 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 E7ESA3 106 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 CLEC3AO75596 197 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 TFEBP19484 476 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 GSTM2P28161 218 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 SSTR2P30874 369 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 CMPK2Q5EBM0 449 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 VN1R5Q7Z5H4 357 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 ZNF595Q8IYB9 648 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 SNX31Q8N9S9 440 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 OR2L5Q8NG80 312 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 FAM57AQ8TBR7 257 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 CA5BP1Q8WTZ4 195 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 ESAMQ96AP7 390 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 CSF3RQ99062 836 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 CAPS2Q9BXY5 557 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 DERL2Q9GZP9 239 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 REXO4Q9GZR2 422 aaKnown RBP19.61■□□□□ 0.73
COL9A3-207ENST00000467819 NT5DC2Q9H857 520 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 COPS7BQ9H9Q2 264 aaPredicted RBP19.61■□□□□ 0.73
COL9A3-207ENST00000467819 TIMMDC1Q9NPL8 285 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 DNAJC11Q9NVH1 559 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 GPRC5BQ9NZH0 403 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 COQ3Q9NZJ6 369 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 KCMF1Q9P0J7 381 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 ITGB1BP2Q9UKP3 347 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 PPIEQ9UNP9 301 aaKnown RBP19.61■□□□□ 0.73
COL9A3-207ENST00000467819 MTO1Q9Y2Z2 717 aaKnown RBP19.61■□□□□ 0.73
COL9A3-207ENST00000467819 SNX24Q9Y343 169 aa19.61■□□□□ 0.73
COL9A3-207ENST00000467819 CLGNO14967 610 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms