RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 NDUFS4O43181 175 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 PSTPIP1O43586 416 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 CEP104O60308 925 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 PSIP1O75475 530 aaKnown RBP9.41□□□□□ -0.9
HDAC3-203ENST00000467533 SERPIND1P05546 499 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 RFPL3SP0C7P2 107 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 RNH1P13489 461 aaKnown RBP9.41□□□□□ -0.9
HDAC3-203ENST00000467533 PAX1P15863 534 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 ALOX12P18054 663 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 HRH2P25021 359 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 ATP5DP30049 168 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 SLC1A1P43005 524 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 TTPAP49638 278 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 GPR143P51810 404 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 HK2P52789 917 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 EIF3EP60228 445 aaKnown RBP9.41□□□□□ -0.9
HDAC3-203ENST00000467533 CRYZQ08257 329 aaKnown RBP9.41□□□□□ -0.9
HDAC3-203ENST00000467533 DUSP8Q13202 625 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 TSTD2Q5T7W7 516 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 NIPAL1Q6NVV3 410 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 BHLHB9Q6PI77 547 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 OPN5Q6U736 354 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 KLHDC8BQ8IXV7 354 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 RASGEF1CQ8N431 466 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 AFAP1L2Q8N4X5 818 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 ACTL9Q8TC94 416 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 ROBO4Q8WZ75 1007 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 SGCZQ96LD1 299 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 JSRP1Q96MG2 331 aaPredicted RBP9.41□□□□□ -0.9
HDAC3-203ENST00000467533 HS3ST6Q96QI5 342 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 FAM118BQ9BPY3 351 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 PIGQQ9BRB3 760 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 BEX2Q9BXY8 128 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 FAM129AQ9BZQ8 928 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 P2RY12Q9H244 342 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 ACKR4Q9NPB9 350 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 CCDC177Q9NQR7 707 aaPredicted RBP9.41□□□□□ -0.9
HDAC3-203ENST00000467533 ZNF701Q9NV72 531 aaPredicted RBP9.41□□□□□ -0.9
HDAC3-203ENST00000467533 ANO10Q9NW15 660 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.41□□□□□ -0.9
HDAC3-203ENST00000467533 ABCA1O95477 2261 aa9.41□□□□□ -0.9
HDAC3-203ENST00000467533 CD8B2A6NJW9 211 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 SNPHO15079 494 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 LCMT2O60294 686 aaKnown RBP9.4□□□□□ -0.9
HDAC3-203ENST00000467533 GAS8O95995 478 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 ZNF888P0CJ79 500 aaPredicted RBP9.4□□□□□ -0.9
HDAC3-203ENST00000467533 RBP3P10745 1247 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 COMTP21964 271 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 CRYGSP22914 178 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 GDF1P27539 372 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 PPP2R1BP30154 601 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 GRK3P35626 688 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 BMPR2Q13873 1038 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 PHKG1Q16816 387 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 KLHL38Q2WGJ6 581 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 PRAMEF20Q5VT98 475 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 HSDL2Q6YN16 418 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 BBS12Q6ZW61 710 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 BTLAQ7Z6A9 289 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 LRRC6Q86X45 466 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 LRRC25Q8N386 305 aaPredicted RBP9.4□□□□□ -0.9
HDAC3-203ENST00000467533 C9orf106Q8NAJ2 232 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 MFSD9Q8NBP5 474 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 OR52K1Q8NGK4 314 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 TIMP4Q99727 224 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 MED18Q9BUE0 208 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 SFXN3Q9BWM7 321 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 PRDM14Q9GZV8 571 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 ZFP64Q9NPA5 681 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 HOMER3Q9NSC5 361 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 QPCTLQ9NXS2 382 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 MARCH4Q9P2E8 410 aaPredicted RBP9.4□□□□□ -0.9
HDAC3-203ENST00000467533 PPIEQ9UNP9 301 aaKnown RBP9.4□□□□□ -0.9
HDAC3-203ENST00000467533 MMACHCQ9Y4U1 282 aa9.4□□□□□ -0.9
HDAC3-203ENST00000467533 LRRC3CA6NJW4 275 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 NIPSNAP2O75323 286 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 NDUFS3O75489 264 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 FREM3P0C091 2139 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 RPS3P23396 243 aaKnown RBP eCLIP9.39□□□□□ -0.91
HDAC3-203ENST00000467533 MC3RP41968 323 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 DIO3P55073 304 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 TBPL1P62380 186 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 OCRLQ01968 901 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 ACVR1Q04771 509 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 FOXF2Q12947 444 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 RCAN2Q14206 197 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 GBX1Q14549 363 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 KCNJ11Q14654 390 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 STX1AQ16623 288 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 PARP6Q2NL67 630 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 ACSBG2Q5FVE4 666 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 CTSL3PQ5NE16 218 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 C6orf52Q5T4I8 152 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 SASS6Q6UVJ0 657 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 C17orf64Q86WR6 236 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 RHOT2Q8IXI1 618 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 LRRC56Q8IYG6 542 aaPredicted RBP9.39□□□□□ -0.91
HDAC3-203ENST00000467533 OTUD6BQ8N6M0 293 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 IGFBPL1Q8WX77 278 aa9.39□□□□□ -0.91
HDAC3-203ENST00000467533 ZNF778Q96MU6 729 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms