RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 OR5M9Q8NGP3 310 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 OR5M3Q8NGP4 307 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 NEIL2Q969S2 332 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 NCLNQ969V3 563 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 PYCR2Q96C36 320 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 ARSGQ96EG1 525 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 VMP1Q96GC9 406 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 PDLIM2Q96JY6 352 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 SH3GL2Q99962 352 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 GPATCH1Q9BRR8 931 aaKnown RBP11.31□□□□□ -0.6
UBR4-211ENST00000467272 CLEC4MQ9H2X3 399 aaPredicted RBP11.31□□□□□ -0.6
UBR4-211ENST00000467272 SH2D2AQ9NP31 389 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 CRIM1Q9NZV1 1036 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 MYOTQ9UBF9 498 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 FBXO5Q9UKT4 447 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 CTAGE9A4FU28 777 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 A6NNC1 897 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 FAM166BA8MTA8 275 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 A8MUA0 341 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 ATE1O95260 518 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 CELA3AP09093 270 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 HOXC12P31275 282 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 KCNJ1P48048 391 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 ZNF75DP51815 510 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 HNRNPFP52597 415 aaKnown RBP11.3□□□□□ -0.6
UBR4-211ENST00000467272 CDKN2DP55273 166 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 HSD17B7P56937 341 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 RAB8AP61006 207 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 RUNX2Q13950 521 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 RIPPLY2Q5TAB7 128 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 PAQR3Q6TCH7 311 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 PAMR1Q6UXH9 720 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 KIAA1328Q86T90 577 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 BIVMQ86UB2 503 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 ZZZ3Q8IYH5 903 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 FAM109AQ8N4B1 249 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 MCUQ8NE86 351 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 FBXL8Q96CD0 374 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 SIGLEC10Q96LC7 697 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 RASL10BQ96S79 203 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 SMC6Q96SB8 1091 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 DESI2Q9BSY9 194 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 IL1RL2Q9HB29 575 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 PLEKHA6Q9Y2H5 1048 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 PCDHGB3Q9Y5G1 929 aa11.3□□□□□ -0.6
UBR4-211ENST00000467272 SDR42E2A6NKP2 422 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 FIGNL2A6NMB9 653 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 CYR61O00622 381 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 WDR1O75083 606 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 ZFAND5O76080 213 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 SERPINA6P08185 405 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 DRD2P14416 443 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 CNR1P21554 472 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 SOX3P41225 446 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 MAGEA5P43359 124 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 KIR2DL3P43628 341 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 AP1S2P56377 157 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 LTBQ06643 244 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 RGS1Q08116 209 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 PPP1R3AQ16821 1122 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 SLC22A16Q86VW1 577 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 GOLM1Q8NBJ4 401 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 C2CD4AQ8NCU7 369 aaPredicted RBP11.29□□□□□ -0.6
UBR4-211ENST00000467272 TRPV3Q8NET8 790 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 WFDC11Q8NEX6 87 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 PTPMT1Q8WUK0 201 aaPredicted RBP11.29□□□□□ -0.6
UBR4-211ENST00000467272 SLC5A11Q8WWX8 675 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 ZNF669Q96BR6 464 aaPredicted RBP11.29□□□□□ -0.6
UBR4-211ENST00000467272 RMND5BQ96G75 393 aaPredicted RBP11.29□□□□□ -0.6
UBR4-211ENST00000467272 SCYL1Q96KG9 808 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 SERPINB12Q96P63 405 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 QRFPRQ96P65 431 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 BAG1Q99933 345 aaPredicted RBP11.29□□□□□ -0.6
UBR4-211ENST00000467272 FAM173AQ9BQD7 235 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 NPLQ9BXD5 320 aaPredicted RBP11.29□□□□□ -0.6
UBR4-211ENST00000467272 PELI2Q9HAT8 420 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 SEMA4BQ9NPR2 832 aaPredicted RBP11.29□□□□□ -0.6
UBR4-211ENST00000467272 SPRR3Q9UBC9 169 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 FBXW2Q9UKT8 454 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 IKZF3Q9UKT9 509 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 CBLCQ9ULV8 474 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 CSPG4Q6UVK1 2322 aa11.29□□□□□ -0.6
UBR4-211ENST00000467272 A8MVJ9 347 aa11.28□□□□□ -0.6
UBR4-211ENST00000467272 HCN1O60741 890 aa11.28□□□□□ -0.6
UBR4-211ENST00000467272 DNASE1P24855 282 aa11.28□□□□□ -0.6
UBR4-211ENST00000467272 PEX19P40855 299 aa11.28□□□□□ -0.6
UBR4-211ENST00000467272 THOC5Q13769 683 aaKnown RBP11.28□□□□□ -0.6
UBR4-211ENST00000467272 SNTB1Q13884 538 aaKnown RBP11.28□□□□□ -0.6
UBR4-211ENST00000467272 ADPRMQ3LIE5 342 aa11.28□□□□□ -0.6
UBR4-211ENST00000467272 C1orf185Q5T7R7 199 aa11.28□□□□□ -0.6
UBR4-211ENST00000467272 ZNF585AQ6P3V2 769 aa11.28□□□□□ -0.6
UBR4-211ENST00000467272 SBSNQ6UWP8 590 aa11.28□□□□□ -0.6
UBR4-211ENST00000467272 IL20RBQ6UXL0 311 aa11.28□□□□□ -0.6
UBR4-211ENST00000467272 CNTN4Q8IWV2 1026 aa11.28□□□□□ -0.6
UBR4-211ENST00000467272 RELL2Q8NC24 303 aaPredicted RBP11.28□□□□□ -0.6
UBR4-211ENST00000467272 NAXEQ8NCW5 288 aa11.28□□□□□ -0.6
UBR4-211ENST00000467272 ARMC2Q8NEN0 867 aa11.28□□□□□ -0.6
UBR4-211ENST00000467272 OR8K3Q8NH51 312 aa11.28□□□□□ -0.6
UBR4-211ENST00000467272 FAM222BQ8WU58 562 aa11.28□□□□□ -0.6
UBR4-211ENST00000467272 SLCO2A1Q92959 643 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms