RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 M1APQ8TC57 530 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 RGMAQ96B86 450 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 C8orf44Q96CB5 159 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 L3HYPDHQ96EM0 354 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 TMEM109Q9BVC6 243 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 PRDM7Q9NQW5 492 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 LGALS13Q9UHV8 139 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 GRID1Q9ULK0 1009 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 SPACA6W5XKT8 324 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 ATMQ13315 3056 aa12.3□□□□□ -0.44
R3HDM1-213ENST00000463230 LOC400499M0QZD8 3231 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 IGKV3D-11A0A0A0MRZ8 115 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 K7EM74 188 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 CLDN4O14493 209 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 SLC28A2O43868 658 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 PRMT3O60678 531 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 SEMA3DO95025 777 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 PRR35P0CG20 571 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 PLA2G2AP14555 144 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 PLA2G16P53816 162 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 PRKAA2P54646 552 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 TRAF3Q13114 568 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 ABRAXAS2Q15018 415 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 NSDHLQ15738 373 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 AP5B1Q2VPB7 878 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 MYLK4Q86YV6 388 aaPredicted RBP12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 ZADH2Q8N4Q0 377 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 THOC3Q96J01 351 aaKnown RBP12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 F2RL3Q96RI0 385 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 SERPINI1Q99574 410 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 EPS8L2Q9H6S3 715 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 MS4A12Q9NXJ0 267 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 TRPS1Q9UHF7 1281 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 DOCK10Q96BY6 2186 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 MLYCDO95822 493 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 NR1D1P20393 614 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 IMPDH1P20839 514 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 ATP5A1P25705 553 aaKnown RBP12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 RAP1GDS1P52306 607 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 EFNA3P52797 238 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 OLR1P78380 273 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 SLC18A2Q05940 514 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 ZNF33BQ06732 778 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 Q0VFX4 171 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 MFAP5Q13361 173 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 RUNX2Q13950 521 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 TERF2Q15554 542 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 ZRSR2Q15696 482 aaKnown RBP12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 ZNF678Q5SXM1 525 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 FAAH2Q6GMR7 532 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 ISLR2Q6UXK2 745 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 UBE3DQ7Z6J8 389 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 MILR1Q7Z6M3 343 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 PTRH1Q86Y79 214 aaKnown RBP12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 SCUBE1Q8IWY4 988 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 ZCCHC7Q8N3Z6 543 aaKnown RBP12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 EPS8L3Q8TE67 593 aaKnown RBP12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 PNPLA2Q96AD5 504 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 LPAR4Q99677 370 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 SLC29A3Q9BZD2 475 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 DAPP1Q9UN19 280 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 RNF11Q9Y3C5 154 aa12.29□□□□□ -0.44
R3HDM1-213ENST00000463230 TNRC6AQ8NDV7 1962 aaKnown RBP12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 TCRBV16S1A1N1A0A5B0 115 aa12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 DLX3O60479 287 aa12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 B3GALT4O96024 378 aa12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 HIST1H1TP22492 207 aaPredicted RBP12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 SOX11P35716 441 aa12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 SLCO1A2P46721 670 aa12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 OR4D2P58180 307 aa12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 ACTN3Q08043 901 aaPredicted RBP12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 IFFO1Q0D2I5 559 aa12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 IFT88Q13099 833 aa12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 SFT2D3Q587I9 215 aa12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 FRG2Q64ET8 278 aa12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 OR4C11Q6IEV9 310 aa12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 ADNP2Q6IQ32 1131 aa12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 ZYG11AQ6WRX3 759 aa12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 PRICKLE2Q7Z3G6 844 aa12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 PPP4R1Q8TF05 950 aa12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 PTCHD1Q96NR3 888 aa12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 FRG2BQ96QU4 278 aa12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 ZNF382Q96SR6 550 aa12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 PARD6BQ9BYG5 372 aa12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 RNF32Q9H0A6 362 aa12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 ZBTB26Q9HCK0 441 aa12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 MMP25Q9NPA2 562 aa12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 PHF11Q9UIL8 331 aa12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 SNX6Q9UNH7 406 aa12.28□□□□□ -0.44
R3HDM1-213ENST00000463230 A0A1W2PPM1 405 aa12.27□□□□□ -0.44
R3HDM1-213ENST00000463230 GOLGA8RI6L899 631 aa12.27□□□□□ -0.44
R3HDM1-213ENST00000463230 B4GALT2O60909 372 aa12.27□□□□□ -0.44
R3HDM1-213ENST00000463230 PROCP04070 461 aa12.27□□□□□ -0.44
R3HDM1-213ENST00000463230 MYL2P10916 166 aa12.27□□□□□ -0.44
R3HDM1-213ENST00000463230 SSR2P43308 183 aa12.27□□□□□ -0.44
R3HDM1-213ENST00000463230 LIM2P55344 173 aa12.27□□□□□ -0.44
R3HDM1-213ENST00000463230 PKNOX1P55347 436 aa12.27□□□□□ -0.44
R3HDM1-213ENST00000463230 DNAJB13P59910 316 aa12.27□□□□□ -0.44
R3HDM1-213ENST00000463230 CLCQ05315 142 aa12.27□□□□□ -0.44
R3HDM1-213ENST00000463230 BIKQ13323 160 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms