RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 PROKR1Q8TCW9 393 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 CREB3L4Q8TEY5 395 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 L3HYPDHQ96EM0 354 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 MVB12AQ96EY5 273 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 PGM2Q96G03 612 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 SMIM10Q96HG1 83 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 HIST1H2AHQ96KK5 128 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 PKNOX2Q96KN3 472 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 C10orf90Q96M02 699 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 OR6C1Q96RD1 312 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 HIST1H2AJQ99878 128 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 CTRCQ99895 268 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 ZFYVE21Q9BQ24 234 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 H2AFJQ9BTM1 129 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 NTMT1Q9BV86 223 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 TRIM54Q9BYV2 358 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 CD244Q9BZW8 370 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 SPNS1Q9H2V7 528 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 MRPL46Q9H2W6 279 aaKnown RBP5.46□□□□□ -1.54
VPS36-202ENST00000462289 RHBGQ9H310 441 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 TMPRSS5Q9H3S3 457 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 ALG9Q9H6U8 611 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 PELI2Q9HAT8 420 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 ZBTB26Q9HCK0 441 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 SLC39A1Q9NY26 324 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 PSD3Q9NYI0 1048 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 AKAP7Q9P0M2 348 aaPredicted RBP5.46□□□□□ -1.54
VPS36-202ENST00000462289 PISDQ9UG56 409 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.46□□□□□ -1.54
VPS36-202ENST00000462289 CIDEBQ9UHD4 219 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 ZNF225Q9UK10 706 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 RARRES3Q9UL19 164 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 TMCO1Q9UM00 188 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 SNX7Q9UNH6 387 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 AP1M2Q9Y6Q5 423 aa5.46□□□□□ -1.54
VPS36-202ENST00000462289 V9GYY5 206 aaPredicted RBP5.46□□□□□ -1.54
VPS36-202ENST00000462289 LOC105369274A0A096LPK9 316 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 LOC102723532A0A0G2JNH3 316 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 A0A1W2PPM1 405 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 VSTM2BA6NLU5 285 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 SRRM3A6NNA2 597 aaPredicted RBP5.45□□□□□ -1.54
VPS36-202ENST00000462289 SYCE1LA8MT33 242 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 A8MT66 165 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 A8MU76 341 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 ISM1B1AKI9 464 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 C21orf140B9A014 251 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 NPIPB8E9PQR5 432 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 POC1B-GALNT4F8VUJ3 575 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 G3V2L1 256 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 K7EPI3 171 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 AGPSO00116 658 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 UBXN8O00124 270 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 HAT1O14929 419 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 ZSCAN9O15535 394 aaPredicted RBP5.45□□□□□ -1.54
VPS36-202ENST00000462289 FOXS1O43638 330 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 LCMT2O60294 686 aaKnown RBP5.45□□□□□ -1.54
VPS36-202ENST00000462289 PLIN3O60664 434 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 CNOT3O75175 753 aaKnown RBP5.45□□□□□ -1.54
VPS36-202ENST00000462289 STK16O75716 305 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 KLF7O75840 302 aaPredicted RBP5.45□□□□□ -1.54
VPS36-202ENST00000462289 RASSF9O75901 435 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 SCELO95171 688 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 RAB40ALP0C0E4 278 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 GNAZP19086 355 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 TNFRSF1AP19438 455 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 WT1P19544 449 aaPredicted RBP5.45□□□□□ -1.54
VPS36-202ENST00000462289 FPR2P25090 351 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 RBMS1P29558 406 aaKnown RBP5.45□□□□□ -1.54
VPS36-202ENST00000462289 HOXC12P31275 282 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 RPA3P35244 121 aaPredicted RBP5.45□□□□□ -1.54
VPS36-202ENST00000462289 BCL6P41182 706 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 AGTR2P50052 363 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 ARFIP1P53367 373 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 SLC18A1P54219 525 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 PRKAA2P54646 552 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 DNAJB13P59910 316 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 RPS15AP62244 130 aaKnown RBP5.45□□□□□ -1.54
VPS36-202ENST00000462289 RPL11P62913 178 aaKnown RBP5.45□□□□□ -1.54
VPS36-202ENST00000462289 CDC16Q13042 620 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 TRAF3Q13114 568 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 GPS2Q13227 327 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 SF1Q15637 639 aaKnown RBP5.45□□□□□ -1.54
VPS36-202ENST00000462289 CR1LQ2VPA4 569 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 C18orf21Q32NC0 220 aaPredicted RBP5.45□□□□□ -1.54
VPS36-202ENST00000462289 TMTC4Q5T4D3 741 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 FRMPD2BQ6IN97 320 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 ARMC6Q6NXE6 501 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 CD300LDQ6UXZ3 194 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 RNF165Q6ZSG1 346 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 COX15Q7KZN9 410 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 MILR1Q7Z6M3 343 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 C17orf64Q86WR6 236 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 OR4N4Q8N0Y3 316 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 LGI4Q8N135 537 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 MFSD9Q8NBP5 474 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 MYRIPQ8NFW9 859 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 OR2W6PQ8NHA6 318 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 UHMK1Q8TAS1 419 aaKnown RBP5.45□□□□□ -1.54
VPS36-202ENST00000462289 NT5CQ8TCD5 201 aa5.45□□□□□ -1.54
VPS36-202ENST00000462289 ZNF483Q8TF39 744 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms