RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 NCLNQ969V3 563 aa15.13■□□□□ 0.01
CMTM3-203ENST00000460097 RMDN1Q96DB5 314 aa15.13■□□□□ 0.01
CMTM3-203ENST00000460097 FAM120BQ96EK7 910 aaKnown RBP15.13■□□□□ 0.01
CMTM3-203ENST00000460097 CRELD1Q96HD1 420 aa15.13■□□□□ 0.01
CMTM3-203ENST00000460097 EXD2Q9NVH0 621 aa15.13■□□□□ 0.01
CMTM3-203ENST00000460097 VNN3Q9NY84 501 aa15.13■□□□□ 0.01
CMTM3-203ENST00000460097 RPS6KA6Q9UK32 745 aa15.13■□□□□ 0.01
CMTM3-203ENST00000460097 PCDHGB2Q9Y5G2 931 aa15.13■□□□□ 0.01
CMTM3-203ENST00000460097 LYVE1Q9Y5Y7 322 aa15.13■□□□□ 0.01
CMTM3-203ENST00000460097 TBC1D3DA0A087WVF3 549 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 TBC1D3IA0A087WXS9 549 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 TBC1D3EA0A087X179 549 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 TBC1D3KA0A087X1G2 549 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 TBC1D3FA6NER0 549 aaPredicted RBP15.12■□□□□ 0.01
CMTM3-203ENST00000460097 LRRC72A6NJI9 287 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 PDZK1P1A8MUH7 402 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 TBC1D3LB9A6J9 549 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 TBC1D3HP0C7X1 549 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 ADRB3P13945 408 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 ACPPP15309 386 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 PIK3CBP42338 1070 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 HTR6P50406 440 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 ADPRHP54922 357 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 C19orf57Q0VDD7 668 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 ABRQ12979 859 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 E2F2Q14209 437 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 TAF1AQ15573 450 aaPredicted RBP15.12■□□□□ 0.01
CMTM3-203ENST00000460097 LPAL2Q16609 132 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 FAM174BQ3ZCQ3 159 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 PMS2CLQ68D20 193 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 TBC1D3GQ6DHY5 549 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 TBC1D3CQ6IPX1 549 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 ERICH5Q6P6B1 374 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 BRAT1Q6PJG6 821 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 C19orf48Q6RUI8 117 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 PARS2Q7L3T8 475 aaKnown RBP15.12■□□□□ 0.01
CMTM3-203ENST00000460097 GOLGA7Q7Z5G4 137 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 TBC1D3Q8IZP1 549 aaPredicted RBP15.12■□□□□ 0.01
CMTM3-203ENST00000460097 TMEM132CQ8N3T6 1108 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 OR13C4Q8NGS5 318 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 CD200R1Q8TD46 325 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 TTC9Q92623 222 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 FOXJ1Q92949 421 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 PYCR2Q96C36 320 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 MARCH7Q9H992 704 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 C3orf14Q9HBI5 128 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 ZBTB20Q9HC78 741 aaPredicted RBP15.12■□□□□ 0.01
CMTM3-203ENST00000460097 PCDHGC4Q9Y5F7 938 aa15.12■□□□□ 0.01
CMTM3-203ENST00000460097 UBA6A0AVT1 1052 aaPredicted RBP15.11■□□□□ 0.01
CMTM3-203ENST00000460097 A8MU76 341 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 FAM25AB3EWG3 89 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 FAM25CB3EWG5 89 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 FAM25GB3EWG6 89 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 PROB1E7EW31 1015 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 PLRG1O43660 514 aaKnown RBP15.11■□□□□ 0.01
CMTM3-203ENST00000460097 SOCS5O75159 536 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 GUCY1B2O75343 617 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 ESR1P03372 595 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 LCKP06239 509 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 GNPDA1P46926 289 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 SEPHS1P49903 392 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 OR2B6P58173 313 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.11■□□□□ 0.01
CMTM3-203ENST00000460097 GPR50Q13585 617 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 GTF2H2Q13888 395 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 TIGD6Q17RP2 521 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 TIMM50Q3ZCQ8 353 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 SPANXN2Q5MJ10 180 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 ATAD3CQ5T2N8 411 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 GTF2H2CQ6P1K8 395 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 SUMF1Q8NBK3 374 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 FAM83FQ8NEG4 500 aaPredicted RBP15.11■□□□□ 0.01
CMTM3-203ENST00000460097 OR4F6Q8NGB9 312 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 C9orf43Q8TAL5 461 aaPredicted RBP15.11■□□□□ 0.01
CMTM3-203ENST00000460097 APH1BQ8WW43 257 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 RAB7BQ96AH8 199 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 MED30Q96HR3 178 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 ITCHQ96J02 903 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 NUAK2Q9H093 628 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 PCED1AQ9H1Q7 454 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 CRNNQ9UBG3 495 aaPredicted RBP15.11■□□□□ 0.01
CMTM3-203ENST00000460097 TRPS1Q9UHF7 1281 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 CFL2Q9Y281 166 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 PLXND1Q9Y4D7 1925 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 SDK1Q7Z5N4 2213 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 A0A1W2PQ67 120 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 GOLGA8CPA6NN73 597 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 CENPXA8MT69 81 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 NOTOA8MTQ0 251 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 METTL12A8MUP2 240 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 NPIPB8E9PQR5 432 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 CDK1P06493 297 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 SLC2A4P14672 509 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 TIMP2P16035 220 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 XPAP23025 273 aaPredicted RBP15.11■□□□□ 0.01
CMTM3-203ENST00000460097 GADD45AP24522 165 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 SOX6P35712 828 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 DHPSP49366 369 aaPredicted RBP15.11■□□□□ 0.01
CMTM3-203ENST00000460097 ITGA1P56199 1179 aa15.11■□□□□ 0.01
CMTM3-203ENST00000460097 TAS2R38P59533 333 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms