RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 PCID2Q5JVF3 399 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 RABGAP1LQ5R372 815 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 NKAIN2Q5VXU1 208 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 BMP8AQ7Z5Y6 402 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 WDR5BQ86VZ2 330 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 ECHDC2Q86YB7 292 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 CENPLQ8N0S6 344 aaPredicted RBP5.18□□□□□ -1.58
VPS41-209ENST00000457055 ZNF276Q8N554 614 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 FADS6Q8N9I5 356 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 L3MBTL4Q8NA19 623 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 PSD4Q8NDX1 1056 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 PNPT1Q8TCS8 783 aaKnown RBP5.18□□□□□ -1.58
VPS41-209ENST00000457055 GPX8Q8TED1 209 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 NRG4Q8WWG1 115 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 HAS2Q92819 552 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 S100PBPQ96BU1 408 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 NMD3Q96D46 503 aaKnown RBP5.18□□□□□ -1.58
VPS41-209ENST00000457055 FAM213AQ9BRX8 229 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 ZYG11BQ9C0D3 744 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 TP63Q9H3D4 680 aaPredicted RBP5.18□□□□□ -1.58
VPS41-209ENST00000457055 GOLPH3Q9H4A6 298 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 COG4Q9H9E3 785 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 CHMP1AQ9HD42 196 aaPredicted RBP5.18□□□□□ -1.58
VPS41-209ENST00000457055 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.18□□□□□ -1.58
VPS41-209ENST00000457055 MED17Q9NVC6 651 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 PRMT7Q9NVM4 692 aaPredicted RBP5.18□□□□□ -1.58
VPS41-209ENST00000457055 THUMPD1Q9NXG2 353 aaKnown RBP5.18□□□□□ -1.58
VPS41-209ENST00000457055 GDE1Q9NZC3 331 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 CHRNA9Q9UGM1 479 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 C3orf18Q9UK00 162 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 DAPP1Q9UN19 280 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 PCDHA12Q9UN75 941 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 ZHX2Q9Y6X8 837 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 ITGB4P16144 1822 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 ABCC6O95255 1503 aa5.18□□□□□ -1.58
VPS41-209ENST00000457055 RTL9Q8NET4 1388 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 TRAV25A0A0B4J276 109 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 A0A0U1RQJ8 604 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 PLSCR5A0PG75 271 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 OR5K3A6NET4 321 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 MGAT4DA6NG13 374 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 A6NL46 340 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 ZNF729A6NN14 1252 aaPredicted RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 ERI2A8K979 691 aaKnown RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 F8W036 122 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 CCDC188H7C350 402 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 AGPSO00116 658 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 TLR4O00206 839 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 TOX3O15405 576 aaPredicted RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 ZNF264O43296 627 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 CCNT2O60583 730 aaKnown RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 MFAP3LO75121 409 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 GLRA3O75311 464 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 SNNO75324 88 aaPredicted RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 SAP30O75446 220 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 TAF5LO75529 589 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 APOL3O95236 402 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 NTSR2O95665 410 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 TOP3BO95985 862 aaKnown RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 AHSGP02765 367 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 SERPINA5P05154 406 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 RPLP2P05387 115 aaKnown RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 SRPRAP08240 638 aaKnown RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 MMP3P08254 477 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 HBQ1P09105 142 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 CLEC2LP0C7M8 214 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 OR2T7P0C7T2 308 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 ICAM2P13598 275 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 IL2RBP14784 551 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 MSH3P20585 1137 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 WARSP23381 471 aaKnown RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 CD40P25942 277 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 IL12BP29460 328 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 BDKRB2P30411 391 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 CXCR5P32302 372 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 CD80P33681 288 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 MAGEA6P43360 314 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 MAGEB1P43366 347 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 OMPP47874 163 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 CSNK1EP49674 416 aaKnown RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 TOB1P50616 345 aaPredicted RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 HK3P52790 923 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 GNG2P59768 71 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 RPS15P62841 145 aaKnown RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 CSNK2A1P68400 391 aaPredicted RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 TROAPQ12815 778 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 IL10RAQ13651 578 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 TRIM16LQ309B1 348 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 PDLIM3Q53GG5 364 aaPredicted RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 LBHQ53QV2 105 aaPredicted RBP5.17□□□□□ -1.58
VPS41-209ENST00000457055 TMEM41BQ5BJD5 291 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 ZNF789Q5FWF6 425 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 C9orf50Q5SZB4 431 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 ATF7IP2Q5U623 682 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 GPR157Q5UAW9 335 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 RNLSQ5VYX0 342 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 LIPMQ5VYY2 423 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 TCEAL6Q6IPX3 200 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 HMBOX1Q6NT76 420 aa5.17□□□□□ -1.58
VPS41-209ENST00000457055 FBXO42Q6P3S6 717 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms