RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 EPHA2P29317 976 aa14.39□□□□□ -0.11
LDLR-202ENST00000455727 MVKQ03426 396 aa14.39□□□□□ -0.11
LDLR-202ENST00000455727 ENPP2Q13822 863 aa14.39□□□□□ -0.11
LDLR-202ENST00000455727 AGBL4Q5VU57 503 aa14.39□□□□□ -0.11
LDLR-202ENST00000455727 EGFLAMQ63HQ2 1017 aa14.39□□□□□ -0.11
LDLR-202ENST00000455727 LAIR1Q6GTX8 287 aa14.39□□□□□ -0.11
LDLR-202ENST00000455727 SLC16A12Q6ZSM3 486 aa14.39□□□□□ -0.11
LDLR-202ENST00000455727 GET4Q7L5D6 327 aaPredicted RBP14.39□□□□□ -0.11
LDLR-202ENST00000455727 C2orf73Q8N5S3 287 aaPredicted RBP14.39□□□□□ -0.11
LDLR-202ENST00000455727 OR4C15Q8NGM1 316 aa14.39□□□□□ -0.11
LDLR-202ENST00000455727 FAM81AQ8TBF8 368 aa14.39□□□□□ -0.11
LDLR-202ENST00000455727 IPCEF1Q8WWN9 437 aaPredicted RBP14.39□□□□□ -0.11
LDLR-202ENST00000455727 ZNF764Q96H86 408 aaPredicted RBP14.39□□□□□ -0.11
LDLR-202ENST00000455727 QRFPRQ96P65 431 aa14.39□□□□□ -0.11
LDLR-202ENST00000455727 ACAT2Q9BWD1 397 aa14.39□□□□□ -0.11
LDLR-202ENST00000455727 DGCR6LQ9BY27 220 aa14.39□□□□□ -0.11
LDLR-202ENST00000455727 RSPH9Q9H1X1 276 aaPredicted RBP14.39□□□□□ -0.11
LDLR-202ENST00000455727 ERVK-18Q9QC07 812 aa14.39□□□□□ -0.11
LDLR-202ENST00000455727 PCDHGA10Q9Y5H3 936 aa14.39□□□□□ -0.11
LDLR-202ENST00000455727 CKAP5Q14008 2032 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 CAPN5O15484 640 aaPredicted RBP14.38□□□□□ -0.11
LDLR-202ENST00000455727 ANXA8P13928 327 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 CD6P30203 668 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 BSGP35613 385 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 TRIM23P36406 574 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 REEP5Q00765 189 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 DMPKQ09013 629 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 ARMC8Q8IUR7 673 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 CCDC71Q8IV32 467 aaPredicted RBP14.38□□□□□ -0.11
LDLR-202ENST00000455727 ANKRD53Q8N9V6 530 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 OR5P2Q8WZ92 322 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 RORBQ92753 470 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 NLNQ9BYT8 704 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 ACSL6Q9UKU0 697 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 ANGPT4Q9Y264 503 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 MAP4K5Q9Y4K4 846 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 A0A1W2PPV9 198 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 SH3PXD2BA1X283 911 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 SLC35G4P0C7Q5 338 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 HMGA2P52926 109 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 MAPK12P53778 367 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 HEPACAMQ14CZ8 416 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 CST6Q15828 149 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 SYT6Q5T7P8 510 aaPredicted RBP14.38□□□□□ -0.11
LDLR-202ENST00000455727 SVOPQ8N4V2 548 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 GEMIN6Q8WXD5 167 aaKnown RBP14.38□□□□□ -0.11
LDLR-202ENST00000455727 BORCS5Q969J3 196 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 TM4SF18Q96CE8 201 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 FEVQ99581 238 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 SORBS1Q9BX66 1292 aaKnown RBP14.38□□□□□ -0.11
LDLR-202ENST00000455727 ZDHHC4Q9NPG8 344 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 TM7SF3Q9NS93 570 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 TESMINQ9Y4I5 508 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 STON1Q9Y6Q2 735 aa14.38□□□□□ -0.11
LDLR-202ENST00000455727 HEATR5BQ9P2D3 2071 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 A0A0J9YVX5 310 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 MID1O15344 667 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 BCAS1O75363 584 aaPredicted RBP14.37□□□□□ -0.11
LDLR-202ENST00000455727 WBP4O75554 376 aaKnown RBP14.37□□□□□ -0.11
LDLR-202ENST00000455727 PCDH8O95206 1070 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 OPN1SWP03999 348 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 CASP9P55211 416 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 BNIP3Q12983 259 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 MICAQ29983 383 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 MLIPQ5VWP3 458 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.37□□□□□ -0.11
LDLR-202ENST00000455727 NUDT18Q6ZVK8 323 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 PRSS48Q7RTY5 328 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 ADGRF3Q8IZF5 1079 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 ZNF540Q8NDQ6 660 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 ST13P5Q8NFI4 369 aaPredicted RBP14.37□□□□□ -0.11
LDLR-202ENST00000455727 OR5AK3PQ8NH89 298 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 NEURL3Q96EH8 262 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 PDXPQ96GD0 296 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 MYOCQ99972 504 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 PSD2Q9BQI7 771 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 DZANK1Q9NVP4 752 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 ADAM29Q9UKF5 820 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 PCDHGA6Q9Y5G7 932 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 ANTXRLA6NF34 631 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 RGS10O43665 173 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 PCDHGA12O60330 932 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 ADH1BP00325 375 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 C5AR1P21730 350 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 FRKP42685 505 aaPredicted RBP14.37□□□□□ -0.11
LDLR-202ENST00000455727 MAPK10P53779 464 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 DSTNP60981 165 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 CTF1Q16619 201 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 SAXO2Q658L1 398 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 KLHL35Q6PF15 583 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 ENTHD1Q8IYW4 607 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 RAB42Q8N4Z0 105 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 OR10G2Q8NGC3 310 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 CHFRQ96EP1 664 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 F2RL3Q96RI0 385 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 SIGLEC11Q96RL6 698 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 CXorf36Q9H7Y0 433 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 TMEM184CQ9NVA4 438 aa14.37□□□□□ -0.11
LDLR-202ENST00000455727 CUEDC1Q9NWM3 386 aaPredicted RBP14.37□□□□□ -0.11
LDLR-202ENST00000455727 POFUT2Q9Y2G5 429 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms