RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 RTL4Q6ZR62 310 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 LIX1Q8N485 282 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 KCT2Q8NC54 265 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 CAMKVQ8NCB2 501 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 OR5T3Q8NGG3 340 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 LRRC45Q96CN5 670 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 PBKQ96KB5 322 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 PRAP1Q96NZ9 151 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 WDR83Q9BRX9 315 aaKnown RBP11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 GOLPH3Q9H4A6 298 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 CXorf56Q9H5V9 222 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 LIN28AQ9H9Z2 209 aaKnown RBP11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 SEMA4BQ9NPR2 832 aaPredicted RBP11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 SACM1LQ9NTJ5 587 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 ZNF226Q9NYT6 803 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 SAMD15Q9P1V8 674 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 RNF14Q9UBS8 474 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 SNX12Q9UMY4 172 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 TESMINQ9Y4I5 508 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 TGP01266 2768 aa11.6□□□□□ -0.55
AC004540.1-204ENST00000449537 MEGF8Q7Z7M0 2845 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 KPNA5O15131 536 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 SIAH2O43255 324 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 CHST10O43529 356 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 TJP3O95049 919 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 ERGP11308 486 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 PSMB4P28070 264 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 SOX18P35713 384 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 PPARGP37231 505 aaPredicted RBP11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 MC3RP41968 323 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 CDKN2BP42772 138 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 RPS15AP62244 130 aaKnown RBP11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 SRSF2Q01130 221 aaKnown RBP11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 POU6F1Q14863 301 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 ARHGAP19Q14CB8 494 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 QSOX2Q6ZRP7 698 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 LUZP2Q86TE4 346 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 CCDC50Q8IVM0 306 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 OR6P1Q8NGX9 317 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 NEIL3Q8TAT5 605 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 KRT35Q92764 455 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 THAP11Q96EK4 314 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 VMP1Q96GC9 406 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 SGCZQ96LD1 299 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 QKIQ96PU8 341 aaKnown RBP eCLIP11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 AARSD1Q9BTE6 412 aaKnown RBP11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 FRMD8P1Q9BZ68 369 aaPredicted RBP11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 ACKR4Q9NPB9 350 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 ABCF3Q9NUQ8 709 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 MYOTQ9UBF9 498 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 SLC22A7Q9Y694 548 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 CR1P17927 2039 aa11.59□□□□□ -0.55
AC004540.1-204ENST00000449537 ROS1P08922 2347 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 TCRBV16S1A1N1A0A5B0 115 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 ZNF839A8K0R7 811 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 TMCC2O75069 709 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 MYO1DO94832 1006 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 MAOAP21397 527 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 PSMA3P25788 255 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 RBL1P28749 1068 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 HSD17B2P37059 387 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 PNLIPRP1P54315 467 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 HERC3Q15034 1050 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 RNF187Q5TA31 235 aaPredicted RBP11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 HECTD2Q5U5R9 776 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 OTOAQ7RTW8 1153 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 ZNF441Q8N8Z8 693 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 GOLM1Q8NBJ4 401 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 FBXO15Q8NCQ5 510 aaPredicted RBP11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 IGFBPL1Q8WX77 278 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 ALG3Q92685 438 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 NTNG2Q96CW9 530 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 TM4SF19Q96DZ7 209 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 SCYL1Q96KG9 808 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 WFIKKN1Q96NZ8 548 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 PANX3Q96QZ0 392 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 RASL10BQ96S79 203 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 FERMT1Q9BQL6 677 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 SLC6A15Q9H2J7 730 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 C10orf88Q9H8K7 445 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 PRDM9Q9NQV7 894 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 TMEM184CQ9NVA4 438 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 ZNF223Q9UK11 482 aaPredicted RBP11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 SAR1BQ9Y6B6 198 aa11.58□□□□□ -0.56
AC004540.1-204ENST00000449537 hCG_1818297A0A087WSY0 165 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 C15orf38-AP3S2A0A0A6YYH1 394 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 MROH6A6NGR9 719 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 CD8B2A6NJW9 211 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 H7C0C1 242 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 SMAPO00193 183 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 WWP2O00308 870 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 PRKNO60260 465 aaPredicted RBP11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 RFPL3SP0C7P2 107 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 IDUAP35475 653 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 ATP5OP48047 213 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 TRPC1P48995 793 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 MARCKSL1P49006 195 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 THEMIS2Q5TEJ8 643 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 PTRHD1Q6GMV3 140 aaKnown RBP11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 SYT10Q6XYQ8 523 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms