RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 MT-CYBP00156 380 aaPredicted RBP18.44■□□□□ 0.54
HMGA1-205ENST00000447654 DHFRP00374 187 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 DMC1Q14565 340 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 MFSD14CQ5VZR4 134 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 LRRTM3Q86VH5 581 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 UBE2J2Q8N2K1 259 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 TMEM132CQ8N3T6 1108 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 NXPE2Q96DL1 559 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 MTERF3Q96E29 417 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 MS4A12Q9NXJ0 267 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 ASIC5Q9NY37 505 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 TMCC3Q9ULS5 477 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 LSM2Q9Y333 95 aaKnown RBP18.44■□□□□ 0.54
HMGA1-205ENST00000447654 CFAP20Q9Y6A4 193 aaKnown RBP18.44■□□□□ 0.54
HMGA1-205ENST00000447654 B4GALT3O60512 393 aa18.43■□□□□ 0.54
HMGA1-205ENST00000447654 B3GAT3O94766 335 aa18.43■□□□□ 0.54
HMGA1-205ENST00000447654 MAPK1P28482 360 aa18.43■□□□□ 0.54
HMGA1-205ENST00000447654 NUDT6P53370 316 aa18.43■□□□□ 0.54
HMGA1-205ENST00000447654 ZNF91Q05481 1191 aa18.43■□□□□ 0.54
HMGA1-205ENST00000447654 ADGRF3Q8IZF5 1079 aa18.43■□□□□ 0.54
HMGA1-205ENST00000447654 TMEM86AQ8N2M4 240 aa18.43■□□□□ 0.54
HMGA1-205ENST00000447654 MS4A15Q8N5U1 240 aa18.43■□□□□ 0.54
HMGA1-205ENST00000447654 TMEM145Q8NBT3 493 aa18.43■□□□□ 0.54
HMGA1-205ENST00000447654 PLA2G15Q8NCC3 412 aa18.43■□□□□ 0.54
HMGA1-205ENST00000447654 WDR36Q8NI36 951 aaKnown RBP18.43■□□□□ 0.54
HMGA1-205ENST00000447654 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.43■□□□□ 0.54
HMGA1-205ENST00000447654 SLC22A8Q8TCC7 542 aa18.43■□□□□ 0.54
HMGA1-205ENST00000447654 KCNC2Q96PR1 638 aa18.43■□□□□ 0.54
HMGA1-205ENST00000447654 GFM1Q96RP9 751 aaKnown RBP18.43■□□□□ 0.54
HMGA1-205ENST00000447654 SAV1Q9H4B6 383 aaPredicted RBP18.43■□□□□ 0.54
HMGA1-205ENST00000447654 EMC3Q9P0I2 261 aa18.43■□□□□ 0.54
HMGA1-205ENST00000447654 POLR3HQ9Y535 204 aaPredicted RBP18.43■□□□□ 0.54
HMGA1-205ENST00000447654 PCDHGA2Q9Y5H1 932 aa18.43■□□□□ 0.54
HMGA1-205ENST00000447654 SLC22A23A1A5C7 686 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 GPR182O15218 404 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 ANXA8P13928 327 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 PRDX3P30048 256 aaKnown RBP18.42■□□□□ 0.54
HMGA1-205ENST00000447654 TM4SF4P48230 202 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 ERVFC1P60507 584 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 TIAL1Q01085 375 aaKnown RBP eCLIP18.42■□□□□ 0.54
HMGA1-205ENST00000447654 AP5B1Q2VPB7 878 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 ZNF284Q2VY69 593 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 FAM174BQ3ZCQ3 159 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 LGALSLQ3ZCW2 172 aaPredicted RBP18.42■□□□□ 0.54
HMGA1-205ENST00000447654 IL31Q6EBC2 164 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 RNF165Q6ZSG1 346 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 SERPINA11Q86U17 422 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 SLC44A2Q8IWA5 706 aaPredicted RBP18.42■□□□□ 0.54
HMGA1-205ENST00000447654 ZNF655Q8N720 491 aaPredicted RBP18.42■□□□□ 0.54
HMGA1-205ENST00000447654 GPR150Q8NGU9 434 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 ZNF436Q9C0F3 470 aaPredicted RBP18.42■□□□□ 0.54
HMGA1-205ENST00000447654 CD93Q9NPY3 652 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 IMPAD1Q9NX62 359 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 GLYATL1P3A0A0U1RQE8 302 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 LCHNA4D1U4 455 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 TMEM88BA6NKF7 163 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 H3BM21 787 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 APOL3O95236 402 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 PGFP49763 221 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 VLDLRP98155 873 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 NR6A1Q15406 480 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 LTB4RQ15722 352 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 MEDAGQ5VYS4 303 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 SCIMPQ6UWF3 145 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 HTR3DQ70Z44 454 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 GPR155Q7Z3F1 870 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 KLHDC9Q8NEP7 349 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 FOXJ1Q92949 421 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 ADAM2Q99965 735 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 DPY30Q9C005 99 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 CLMPQ9H6B4 373 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 KCMF1Q9P0J7 381 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 FBXW11Q9UKB1 542 aa18.42■□□□□ 0.54
HMGA1-205ENST00000447654 MPTX1A8MV57 137 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 ARVCFO00192 962 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 CBX4O00257 560 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 ECI2O75521 394 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 CDRT1O95170 752 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 RPL9P32969 192 aaKnown RBP18.41■□□□□ 0.54
HMGA1-205ENST00000447654 INPP1P49441 399 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 CLCN4P51793 760 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 CORO6Q6QEF8 472 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 CBLL1Q75N03 491 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 ATAD1Q8NBU5 361 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 OR2T4Q8NH00 348 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 SIPA1Q96FS4 1042 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 SCMH1Q96GD3 660 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 OR2M2Q96R28 347 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 CCM2Q9BSQ5 444 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 COA4Q9NYJ1 87 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 DUSP12Q9UNI6 340 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 TDRD15B5MCY1 1934 aaKnown RBP18.41■□□□□ 0.54
HMGA1-205ENST00000447654 A0A0U1RQF3 1178 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 SLC6A1P30531 599 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 ZNF81P51508 661 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 ATP12AP54707 1039 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 PLIN5Q00G26 463 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 SREBF2Q12772 1141 aa18.41■□□□□ 0.54
HMGA1-205ENST00000447654 MLLT11Q13015 90 aaPredicted RBP18.41■□□□□ 0.54
HMGA1-205ENST00000447654 HNRNPA0Q13151 305 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms