RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 RUNX2Q13950 521 aa9.84□□□□□ -0.83
MCF2L-216ENST00000439475 INPP5JQ15735 1006 aaPredicted RBP9.84□□□□□ -0.83
MCF2L-216ENST00000439475 IGFBP7Q16270 282 aa9.84□□□□□ -0.83
MCF2L-216ENST00000439475 CPSF6Q16630 551 aaKnown RBP eCLIP9.84□□□□□ -0.83
MCF2L-216ENST00000439475 MEP1AQ16819 746 aa9.84□□□□□ -0.83
MCF2L-216ENST00000439475 COLEC12Q5KU26 742 aa9.84□□□□□ -0.83
MCF2L-216ENST00000439475 C10orf62Q5T681 223 aaPredicted RBP9.84□□□□□ -0.83
MCF2L-216ENST00000439475 B3GNTL1Q67FW5 361 aaPredicted RBP9.84□□□□□ -0.83
MCF2L-216ENST00000439475 TTC19Q6DKK2 380 aaPredicted RBP9.84□□□□□ -0.83
MCF2L-216ENST00000439475 GOLGA7Q7Z5G4 137 aa9.84□□□□□ -0.83
MCF2L-216ENST00000439475 MILR1Q7Z6M3 343 aa9.84□□□□□ -0.83
MCF2L-216ENST00000439475 ZNF595Q8IYB9 648 aa9.84□□□□□ -0.83
MCF2L-216ENST00000439475 SIRT6Q8N6T7 355 aa9.84□□□□□ -0.83
MCF2L-216ENST00000439475 PSMF1Q92530 271 aa9.84□□□□□ -0.83
MCF2L-216ENST00000439475 MIB2Q96AX9 1013 aa9.84□□□□□ -0.83
MCF2L-216ENST00000439475 RGMAQ96B86 450 aa9.84□□□□□ -0.83
MCF2L-216ENST00000439475 CNDP1Q96KN2 507 aa9.84□□□□□ -0.83
MCF2L-216ENST00000439475 NTMT1Q9BV86 223 aa9.84□□□□□ -0.83
MCF2L-216ENST00000439475 MS4A8Q9BY19 250 aa9.84□□□□□ -0.83
MCF2L-216ENST00000439475 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.84□□□□□ -0.83
MCF2L-216ENST00000439475 NOL11Q9H8H0 719 aaKnown RBP9.84□□□□□ -0.83
MCF2L-216ENST00000439475 ZBTB20Q9HC78 741 aaPredicted RBP9.84□□□□□ -0.83
MCF2L-216ENST00000439475 LYRM4Q9HD34 91 aa9.84□□□□□ -0.83
MCF2L-216ENST00000439475 MMP25Q9NPA2 562 aa9.84□□□□□ -0.83
MCF2L-216ENST00000439475 PRDM7Q9NQW5 492 aa9.84□□□□□ -0.83
MCF2L-216ENST00000439475 AGPAT4Q9NRZ5 378 aa9.84□□□□□ -0.83
MCF2L-216ENST00000439475 MS4A12Q9NXJ0 267 aa9.84□□□□□ -0.83
MCF2L-216ENST00000439475 AHSPQ9NZD4 102 aa9.84□□□□□ -0.83
MCF2L-216ENST00000439475 TBK1Q9UHD2 729 aa9.84□□□□□ -0.83
MCF2L-216ENST00000439475 DAPP1Q9UN19 280 aa9.84□□□□□ -0.83
MCF2L-216ENST00000439475 COPG1Q9Y678 874 aaKnown RBP9.84□□□□□ -0.83
MCF2L-216ENST00000439475 TRAV17A0A0B4J275 112 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 TCRBV16S1A1N1A0A5B0 115 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 OR2W5A6NFC9 320 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 FAM227AF5H4B4 570 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 PYCARD-AS1I3L0S3 204 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 ZNF500O60304 480 aaPredicted RBP9.83□□□□□ -0.84
MCF2L-216ENST00000439475 CTNSO60931 367 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 SIX3O95343 332 aaPredicted RBP9.83□□□□□ -0.84
MCF2L-216ENST00000439475 ITGAMP11215 1152 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 KRT15P19012 456 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 HIST1H1TP22492 207 aaPredicted RBP9.83□□□□□ -0.84
MCF2L-216ENST00000439475 GCAP28676 217 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 TLX1P31314 330 aaPredicted RBP9.83□□□□□ -0.84
MCF2L-216ENST00000439475 SSR2P43308 183 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 CCT5P48643 541 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 CD97P48960 835 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 LIM2P55344 173 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 SLC26A5P58743 744 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 BTG2P78543 158 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 ZNF33BQ06732 778 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 STX4Q12846 297 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 BIKQ13323 160 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 SERTAD2Q14140 314 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 ZNF169Q14929 603 aaPredicted RBP9.83□□□□□ -0.84
MCF2L-216ENST00000439475 KHDRBS2Q5VWX1 349 aaKnown RBP9.83□□□□□ -0.84
MCF2L-216ENST00000439475 OR4C11Q6IEV9 310 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 RPUSD3Q6P087 351 aaKnown RBP9.83□□□□□ -0.84
MCF2L-216ENST00000439475 VN1R5Q7Z5H4 357 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 SLC22A9Q8IVM8 553 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 GSPT2Q8IYD1 628 aaKnown RBP9.83□□□□□ -0.84
MCF2L-216ENST00000439475 CISD2Q8N5K1 135 aaKnown RBP9.83□□□□□ -0.84
MCF2L-216ENST00000439475 SLC5A8Q8N695 610 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 ACOT4Q8N9L9 421 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 L3MBTL4Q8NA19 623 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 GALNT11Q8NCW6 608 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 MYRIPQ8NFW9 859 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 OR1N1Q8NGS0 311 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 HUS1BQ8NHY5 278 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 TSLPQ969D9 159 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 QRFPRQ96P65 431 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 MESP1Q9BRJ9 268 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 AICDAQ9GZX7 198 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 NMRK1Q9NWW6 199 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 TMEM216Q9P0N5 145 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 LUZP4Q9P127 313 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 LOC400499M0QZD8 3231 aa9.83□□□□□ -0.84
MCF2L-216ENST00000439475 LRRC14BA6NHZ5 514 aa9.82□□□□□ -0.84
MCF2L-216ENST00000439475 SAGE2PA6NJ88 616 aa9.82□□□□□ -0.84
MCF2L-216ENST00000439475 FOXE1O00358 373 aaPredicted RBP9.82□□□□□ -0.84
MCF2L-216ENST00000439475 GLRA3O75311 464 aa9.82□□□□□ -0.84
MCF2L-216ENST00000439475 SH3BGRLO75368 114 aa9.82□□□□□ -0.84
MCF2L-216ENST00000439475 SUPT7LO94864 414 aa9.82□□□□□ -0.84
MCF2L-216ENST00000439475 TBX6O95947 436 aaPredicted RBP9.82□□□□□ -0.84
MCF2L-216ENST00000439475 OTCP00480 354 aa9.82□□□□□ -0.84
MCF2L-216ENST00000439475 IFNA16P05015 189 aa9.82□□□□□ -0.84
MCF2L-216ENST00000439475 TNNI3P19429 210 aa9.82□□□□□ -0.84
MCF2L-216ENST00000439475 CPN2P22792 545 aa9.82□□□□□ -0.84
MCF2L-216ENST00000439475 ATP5F1P24539 256 aaPredicted RBP9.82□□□□□ -0.84
MCF2L-216ENST00000439475 ATP5A1P25705 553 aaKnown RBP9.82□□□□□ -0.84
MCF2L-216ENST00000439475 CERS1P27544 350 aa9.82□□□□□ -0.84
MCF2L-216ENST00000439475 SOX11P35716 441 aa9.82□□□□□ -0.84
MCF2L-216ENST00000439475 CLCN2P51788 898 aa9.82□□□□□ -0.84
MCF2L-216ENST00000439475 EFNA3P52797 238 aa9.82□□□□□ -0.84
MCF2L-216ENST00000439475 NAA20P61599 178 aa9.82□□□□□ -0.84
MCF2L-216ENST00000439475 RPS13P62277 151 aaKnown RBP9.82□□□□□ -0.84
MCF2L-216ENST00000439475 IFT88Q13099 833 aa9.82□□□□□ -0.84
MCF2L-216ENST00000439475 SLAMF1Q13291 335 aa9.82□□□□□ -0.84
MCF2L-216ENST00000439475 CUL3Q13618 768 aa9.82□□□□□ -0.84
MCF2L-216ENST00000439475 ELOAQ14241 798 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms