RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 C14orf105Q9NVL8 296 aa11.63□□□□□ -0.55
NEK1-201ENST00000439128 RPH3AQ9Y2J0 694 aaPredicted RBP11.63□□□□□ -0.55
NEK1-201ENST00000439128 NSG1A0A0A6YYJ2 146 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 MT-ND5P03915 603 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 TACSTD2P09758 323 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 PGCP20142 388 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 CTBSQ01459 385 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 ST3GAL3Q11203 375 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 C5orf22Q49AR2 442 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 OLFML2AQ68BL7 652 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 GTF2IRD2BQ6EKJ0 949 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 GTF2IRD2Q86UP8 949 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 WDTC1Q8N5D0 677 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 OR2L3Q8NG85 312 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 KCNA7Q96RP8 456 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 USB1Q9BQ65 265 aaKnown RBP11.62□□□□□ -0.55
NEK1-201ENST00000439128 VSTM2BA6NLU5 285 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 ENDOUP21128 410 aaKnown RBP11.62□□□□□ -0.55
NEK1-201ENST00000439128 RPS9P46781 194 aaKnown RBP11.62□□□□□ -0.55
NEK1-201ENST00000439128 TSPAN5P62079 268 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 NIPAL4Q0D2K0 466 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 STK11Q15831 433 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 ZNF283Q8N7M2 679 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 MDGA1Q8NFP4 955 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 FOXQ1Q9C009 403 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 SLC6A17Q9H1V8 727 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 ARRDC1-AS1Q9H2J1 176 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 DAPK2Q9UIK4 370 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 GLI3P10071 1580 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 SNPHO15079 494 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 SSNA1O43805 119 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 CD46P15529 392 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 IL4RP24394 825 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 UNQ6126/PRO20091Q6UXV3 157 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 LARP4Q71RC2 724 aaKnown RBP eCLIP11.62□□□□□ -0.55
NEK1-201ENST00000439128 HSD11B1LQ7Z5J1 315 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 PGAM4Q8N0Y7 254 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 FAM174AQ8TBP5 190 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 ZFRQ96KR1 1074 aaKnown RBP11.62□□□□□ -0.55
NEK1-201ENST00000439128 RDH14Q9HBH5 336 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 ANKMY1Q9P2S6 941 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 RLN1P04808 185 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 H1F0P07305 194 aaKnown RBP11.62□□□□□ -0.55
NEK1-201ENST00000439128 GDF1P27539 372 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 RRADP55042 308 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 GMFBP60983 142 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 CBFBQ13951 182 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 AMER2Q8N7J2 671 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 CHFRQ96EP1 664 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 B3GNT4Q9C0J1 378 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 SOX17Q9H6I2 414 aaPredicted RBP11.62□□□□□ -0.55
NEK1-201ENST00000439128 HSFX1Q9UBD0 423 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 FAM159BA6NKW6 160 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 TMEM233B4DJY2 109 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 TLR4O00206 839 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 RTCAO00442 366 aaKnown RBP11.62□□□□□ -0.55
NEK1-201ENST00000439128 IGHEP01854 428 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 ITGA5P08648 1049 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 NELFEP18615 380 aaKnown RBP11.62□□□□□ -0.55
NEK1-201ENST00000439128 MSX1P28360 303 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 HMGCLP35914 325 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 SCN1BQ07699 218 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 DPYSQ14117 519 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 BICRALQ6AI39 1079 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 PM20D1Q6GTS8 502 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 HSDL2Q6YN16 418 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 DNAAF1Q8NEP3 725 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 ELSPBP1Q96BH3 223 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 TESCQ96BS2 214 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 SLC6A18Q96N87 628 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 GPR22Q99680 433 aa11.62□□□□□ -0.55
NEK1-201ENST00000439128 POLDIP3Q9BY77 421 aaKnown RBP11.62□□□□□ -0.55
NEK1-201ENST00000439128 BAZ2AQ9UIF9 1905 aaKnown RBP11.61□□□□□ -0.55
NEK1-201ENST00000439128 A0A0A6YYC8 382 aaPredicted RBP11.61□□□□□ -0.55
NEK1-201ENST00000439128 I3L1I5 382 aaPredicted RBP11.61□□□□□ -0.55
NEK1-201ENST00000439128 SGK494L7N484 410 aa11.61□□□□□ -0.55
NEK1-201ENST00000439128 SCRG1O75711 98 aa11.61□□□□□ -0.55
NEK1-201ENST00000439128 KRT36O76013 467 aa11.61□□□□□ -0.55
NEK1-201ENST00000439128 OR12D1P0DN82 309 aa11.61□□□□□ -0.55
NEK1-201ENST00000439128 TIMP2P16035 220 aa11.61□□□□□ -0.55
NEK1-201ENST00000439128 FAUP35544 74 aaKnown RBP11.61□□□□□ -0.55
NEK1-201ENST00000439128 MAZP56270 477 aaKnown RBP11.61□□□□□ -0.55
NEK1-201ENST00000439128 RPA4Q13156 261 aa11.61□□□□□ -0.55
NEK1-201ENST00000439128 CBX3Q13185 183 aa11.61□□□□□ -0.55
NEK1-201ENST00000439128 CYP1B1Q16678 543 aa11.61□□□□□ -0.55
NEK1-201ENST00000439128 KLHDC8AQ8IYD2 350 aa11.61□□□□□ -0.55
NEK1-201ENST00000439128 GEMIN6Q8WXD5 167 aaKnown RBP11.61□□□□□ -0.55
NEK1-201ENST00000439128 CAMK2AQ9UQM7 478 aa11.61□□□□□ -0.55
NEK1-201ENST00000439128 hCG_1807616A0A1W2PRN6 198 aa11.61□□□□□ -0.55
NEK1-201ENST00000439128 GJE1A6NN92 205 aa11.61□□□□□ -0.55
NEK1-201ENST00000439128 LINC01565O15544 149 aa11.61□□□□□ -0.55
NEK1-201ENST00000439128 DLX3O60479 287 aa11.61□□□□□ -0.55
NEK1-201ENST00000439128 G6PDP11413 515 aa11.61□□□□□ -0.55
NEK1-201ENST00000439128 IFI30P13284 250 aa11.61□□□□□ -0.55
NEK1-201ENST00000439128 AOC1P19801 751 aa11.61□□□□□ -0.55
NEK1-201ENST00000439128 CTHP32929 405 aa11.61□□□□□ -0.55
NEK1-201ENST00000439128 RPS6KA3P51812 740 aa11.61□□□□□ -0.55
NEK1-201ENST00000439128 ALDH16A1Q8IZ83 802 aa11.61□□□□□ -0.55
NEK1-201ENST00000439128 CNEP1R1Q8N9A8 125 aa11.61□□□□□ -0.55
NEK1-201ENST00000439128 BOCQ9BWV1 1114 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms