RNA–Protein interactions for RNA: ENST00000436436.5

R3HDM1-207, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-207ENST00000436436 HPS4Q9NQG7 708 aa2.4□□□□□ -2.03
R3HDM1-207ENST00000436436 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.4□□□□□ -2.03
R3HDM1-207ENST00000436436 CNGB3Q9NQW8 809 aa2.4□□□□□ -2.03
R3HDM1-207ENST00000436436 GKN1Q9NS71 199 aa2.4□□□□□ -2.03
R3HDM1-207ENST00000436436 ANO10Q9NW15 660 aa2.4□□□□□ -2.03
R3HDM1-207ENST00000436436 BEX4Q9NWD9 120 aaPredicted RBP2.4□□□□□ -2.03
R3HDM1-207ENST00000436436 TAS2R3Q9NYW6 316 aa2.4□□□□□ -2.03
R3HDM1-207ENST00000436436 HCN3Q9P1Z3 774 aa2.4□□□□□ -2.03
R3HDM1-207ENST00000436436 EXTL2Q9UBQ6 330 aa2.4□□□□□ -2.03
R3HDM1-207ENST00000436436 SEC63Q9UGP8 760 aaKnown RBP2.4□□□□□ -2.03
R3HDM1-207ENST00000436436 LAMP5Q9UJQ1 280 aa2.4□□□□□ -2.03
R3HDM1-207ENST00000436436 HPCAL4Q9UM19 191 aa2.4□□□□□ -2.03
R3HDM1-207ENST00000436436 PPIEQ9UNP9 301 aaKnown RBP2.4□□□□□ -2.03
R3HDM1-207ENST00000436436 LIPT1Q9Y234 373 aa2.4□□□□□ -2.03
R3HDM1-207ENST00000436436 PIN4Q9Y237 131 aaKnown RBP2.4□□□□□ -2.03
R3HDM1-207ENST00000436436 KCNK7Q9Y2U2 307 aa2.4□□□□□ -2.03
R3HDM1-207ENST00000436436 NOTCH1P46531 2555 aa2.4□□□□□ -2.03
R3HDM1-207ENST00000436436 TNRC6BQ9UPQ9 1833 aaKnown RBP2.4□□□□□ -2.03
R3HDM1-207ENST00000436436 PDCD11Q14690 1871 aaKnown RBP2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 COL1A2P08123 1366 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 SDK2Q58EX2 2172 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 CSPG4Q6UVK1 2322 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 GOLGA6L10A0A0M3HER8 536 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 FAM237BA0A1B0GVD1 139 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 A0A1W2PRV1 198 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 FRMD3A2A2Y4 597 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 A4D1N5 150 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 SH2D7A6NKC9 451 aaPredicted RBP2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 CCDC169A6NNP5 214 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 K7EQS6 105 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 CACNB4O00305 520 aaPredicted RBP2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 CTDSP2O14595 271 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 CASQ2O14958 399 aaPredicted RBP2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 ZBTB5O15062 677 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 MCF2LO15068 1137 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 SCAMP1O15126 338 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 KIF5CO60282 957 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 TSC22D2O75157 780 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 REC8O95072 547 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 SEC24AO95486 1093 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 PRAMEF12O95522 483 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 CLDN1O95832 211 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 OPN1MWP04001 364 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 ABCB1P08183 1280 aaPredicted RBP2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 PATE4P0C8F1 98 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 OPN1MW2P0DN77 364 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 OPN1MW3P0DN78 364 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 SELLP14151 372 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 COX7A2P14406 83 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 GNSP15586 552 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 S1PR1P21453 382 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 TMOD1P28289 359 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 PBLDP30039 288 aaPredicted RBP2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 MATKP42679 507 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 MATR3P43243 847 aaKnown RBP eCLIP2.39□□□□□ -2.034e-9■■■□□ 17.9
R3HDM1-207ENST00000436436 SLC26A2P50443 739 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 EIF3BP55884 814 aaKnown RBP2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 LMO4P61968 165 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 ARF5P84085 180 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 GOLGA8DPQ0D2H9 430 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 TMEM115Q12893 351 aaPredicted RBP2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 RALGDSQ12967 914 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 DNAJC3Q13217 504 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 ITGADQ13349 1161 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 DRP2Q13474 957 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 PTK6Q13882 451 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 RCN2Q14257 317 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 MEP1BQ16820 701 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 TYSND1Q2T9J0 566 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 CEP55Q53EZ4 464 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 HSP90AA5PQ58FG0 334 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 ZNF766Q5HY98 468 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 NHSL2Q5HYW2 709 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 KRBOX4Q5JUW0 171 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 ZSCAN25Q6NSZ9 544 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 B3GNT6Q6ZMB0 384 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 LINC00696Q6ZRV3 163 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 KCTD8Q6ZWB6 473 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 OTOAQ7RTW8 1153 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 ADGRG6Q86SQ4 1221 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 CCDC60Q8IWA6 550 aaPredicted RBP2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 DSELQ8IZU8 1212 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 C1orf87Q8N0U7 546 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 SPAG16Q8N0X2 631 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 SIX6OS1Q8N1H7 587 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 TNIP2Q8NFZ5 429 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 ZNF461Q8TAF7 563 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 SSC4DQ8WTU2 575 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 SLC20A1Q8WUM9 679 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 GIMAP1Q8WWP7 306 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 SMARCE1Q969G3 411 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 ELP4Q96EB1 424 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 MOCOSQ96EN8 888 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 SAT2Q96F10 170 aaPredicted RBP2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 PERPQ96FX8 193 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 PDLIM5Q96HC4 596 aaKnown RBP2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 MAP7D2Q96T17 732 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 CD180Q99467 661 aa2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 NAA11Q9BSU3 229 aaPredicted RBP2.39□□□□□ -2.03
R3HDM1-207ENST00000436436 CRACR2AQ9BSW2 395 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms